EST details — SGN-E372414
| Search information |
| Request: 372414 | Match: SGN-E372414 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C179684 | Clone name: TUS-32-G10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179684 is on microarray TOM1 spot ID 1-1-7.3.1.15 [Order] [Tomato Microarray Database]
See unigene SGN-U575402 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C80194 [cLET-11-I16] | Trace: SGN-T105313 | EST: SGN-E292850 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C179684 [TUS-32-G10] | Trace: SGN-T185908 | EST: SGN-E372413 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E372414 | Length: 686 bp (937 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E372414 [] (trimmed)
CTCTTTGGCTCATTCTCCCAGAAAAAAACATTCTCTTCATCCGCCATTAACGCTCGCCGCATCACAAGCTTCGCTCCATCAACAGCACCATTTTT
TTTTTGATCTTCCAATAGTCAAAGAGGTTGGAGGATCAGATCTAGGAGTTGAAATCATGTCGTTTACAGGGACTCAACAGAAATGTAAGGCTTGT
GAAAAAACTGTTTACCCAGTTGAGCTTTTGTCAGCTGATGGGATTAGTTATCACAAATCTTGTTTCAAGTGTACTCATTGTAAAGGAACTCTCAA
GTTGAGCAGTTACTCCTCAATGGAAGGTGTTCTGTATTGCAAGCCTCATTTTGAGCAGCTCTACAAGGAGTCTGGCAACTTCAATAAGAACTTTC
AATCCCCTGTGAAGTCAGCTGAGAAGTTAACTCCAATGCTGACAAAATCTCCAAGCAAAGCTGCCGGCATGTTTTCTGGGACACAGGAAAAATGT
GCCACCTGTGGTAAAACGGCTTATCCACTTGAGAAGGTGACAGTGGAGAACCAAAGTTATCACAAGTCGTGTTTCAAGTGTTCTCATGGTGGGTG
CTCTTTAAATCCTTCGAATTATGCTGCCCTAGATGGGATATTGTACTGCAAACCTCATTTTTCACAGCTTTTCAAGGAGAAAGGCAGCTACAATC
ATTTAATCAAGTCTGCTTCAA
TTTTTGATCTTCCAATAGTCAAAGAGGTTGGAGGATCAGATCTAGGAGTTGAAATCATGTCGTTTACAGGGACTCAACAGAAATGTAAGGCTTGT
GAAAAAACTGTTTACCCAGTTGAGCTTTTGTCAGCTGATGGGATTAGTTATCACAAATCTTGTTTCAAGTGTACTCATTGTAAAGGAACTCTCAA
GTTGAGCAGTTACTCCTCAATGGAAGGTGTTCTGTATTGCAAGCCTCATTTTGAGCAGCTCTACAAGGAGTCTGGCAACTTCAATAAGAACTTTC
AATCCCCTGTGAAGTCAGCTGAGAAGTTAACTCCAATGCTGACAAAATCTCCAAGCAAAGCTGCCGGCATGTTTTCTGGGACACAGGAAAAATGT
GCCACCTGTGGTAAAACGGCTTATCCACTTGAGAAGGTGACAGTGGAGAACCAAAGTTATCACAAGTCGTGTTTCAAGTGTTCTCATGGTGGGTG
CTCTTTAAATCCTTCGAATTATGCTGCCCTAGATGGGATATTGTACTGCAAACCTCATTTTTCACAGCTTTTCAAGGAGAAAGGCAGCTACAATC
ATTTAATCAAGTCTGCTTCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E372414] | SGN-U575402 | Tomato 200607 | Build 2 | 37 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T185909 [Download][View] | Facility Assigned ID: FA0AAD20BD05RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
