EST details — SGN-E374501
| Search information |
| Request: 374501 | Match: SGN-E374501 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C181968 | Clone name: TUS-38-F14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181968 is on microarray TOM1 spot ID 1-1-3.2.10.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83090 [cLET-23-E22] | Trace: SGN-T108205 | EST: SGN-E295480 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181968 [TUS-38-F14] | Trace: SGN-T187772 | EST: SGN-E374502 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E374501 | Length: 712 bp (912 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E374501 [] (trimmed)
GGTCCTCTCAAGAACTTTAAAGTCAATAAACAAACAAGAATTTTCAAACTTGTCGACTCCCAAAAGATCCCAAAAAAAAAAACACCACTAAATTA
GTTGGCATTCCACTACTTCAAGTTTTGAAAACAACCAAATTAACCCCTCAAAATTCTGGTAACTCTAATAAGTCCCCAGACTTTATGAAAACACT
GTACCAAAAGTCCATATCATCCTCTAATTTTGCTCCAACATCCTTCTCTACATTTTCTTGTTTCATGTCATGAAATGGAAATTGAACTTGTAATT
CTTCACCACCACCACTCGTGGACAAACCGTCCGTCCAGAAACTCTCATCGATCTCTGGAATAAAATTTTCAGATGAGTCTATTTGGTCGTTACTG
TTCGAGATGTCCATTGTCACGGCTAGTGAATCGGCCGTGACAGTCGACATCTCGCTAGATGACAATTGTGGCGAGTTCGGGCCGGACCCAAGCCC
GGGCCCGTCTTCTTTGATGTTGCTAAAATTGTTTGAACTTTTCAAGGCAATTTGAGAAGTACAAGGAGCTTTGGAATCCTTGTTTTTTGAGTGTC
TTTTGGAGCTTTGAGGAGGCTGATAATTTTTAAGCCTTTTTTTCAAGTGAGTGTGCCATACATTTTTTATTTCATTATCTGTTCGTCCCGGTAAT
CTAGCTGCTATCGCAGACCATCTATTTGCCAGCATTTCATGTAATTG
GTTGGCATTCCACTACTTCAAGTTTTGAAAACAACCAAATTAACCCCTCAAAATTCTGGTAACTCTAATAAGTCCCCAGACTTTATGAAAACACT
GTACCAAAAGTCCATATCATCCTCTAATTTTGCTCCAACATCCTTCTCTACATTTTCTTGTTTCATGTCATGAAATGGAAATTGAACTTGTAATT
CTTCACCACCACCACTCGTGGACAAACCGTCCGTCCAGAAACTCTCATCGATCTCTGGAATAAAATTTTCAGATGAGTCTATTTGGTCGTTACTG
TTCGAGATGTCCATTGTCACGGCTAGTGAATCGGCCGTGACAGTCGACATCTCGCTAGATGACAATTGTGGCGAGTTCGGGCCGGACCCAAGCCC
GGGCCCGTCTTCTTTGATGTTGCTAAAATTGTTTGAACTTTTCAAGGCAATTTGAGAAGTACAAGGAGCTTTGGAATCCTTGTTTTTTGAGTGTC
TTTTGGAGCTTTGAGGAGGCTGATAATTTTTAAGCCTTTTTTTCAAGTGAGTGTGCCATACATTTTTTATTTCATTATCTGTTCGTCCCGGTAAT
CTAGCTGCTATCGCAGACCATCTATTTGCCAGCATTTCATGTAATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E374501] | SGN-U573248 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T187771 [Download][View] | Facility Assigned ID: FA0AAD26DC07FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
