EST details — SGN-E375514
| Search information |
| Request: 375514 | Match: SGN-E375514 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C180678 | Clone name: TUS-34-P20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180678 is on microarray TOM1 spot ID 1-1-5.4.19.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C34342 [cLEG-30-J18] | Trace: SGN-T69145 | EST: SGN-E255419 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C180678 [TUS-34-P20] | Trace: SGN-T187281 | EST: SGN-E375513 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E375514 | Length: 316 bp (961 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E375514 [] (trimmed)
TTTAGTCGTAACTTTAGTCAAACTTCGTAATAATTTAGTAAGTTAAAATATATTAGAAATTTTCAGAATTCATAAACTTTAAATTTTAAATTTTG
ACTTCGCTTTGTGTGACTATACAATTACAGAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCT
GTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAA
TATTCTCTAGTGGGAATCTACTAGGAGTAAT
ACTTCGCTTTGTGTGACTATACAATTACAGAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCT
GTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAA
TATTCTCTAGTGGGAATCTACTAGGAGTAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E375514] | SGN-U580375 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T187282 [Download][View] | Facility Assigned ID: FA0AAD22DH10RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.905 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |
Working
