EST details — SGN-E375900
| Search information |
| Request: 375900 | Match: SGN-E375900 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C173262 | Clone name: TUS-15-K20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173262 is on microarray TOM1 spot ID 1-1-5.3.19.2 [Order] [Tomato Microarray Database]
See unigene SGN-U575402 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C1945 [cLEC-14-F6] | Trace: SGN-T26502 | EST: SGN-E204886 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C173262 [TUS-15-K20] | Trace: SGN-T188755 | EST: SGN-E375901 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E375900 | Length: 655 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375900 [] (trimmed)
GACTGCACAACTTTCCTGCCAAAGGTCATGATAAAAAGCAGGAACATTTAACATCCGAAAGTTAAAAAGGAACAACAACAACAACAACAACGAAA
GGATAAGTTTTCACAGTTGTGTAAATCAAATCACACAGTAAACAAAAATGGCACACCAATTGGAAATATACGGAAAAAAAGGGAGGAAACAAATA
TTAAAAAACCAAGCTCCCTGGATAAAATAGTTGATGGAAATATAGTTTAAAAATCTGGAACAGTTGCTGCTGGACGCTTCATTGAAGCAAACTTG
ATTAAATGATTGTAGCTGCCTTTCTCCTTGAAAAGCTGTGAAAAATGAGGTTTGCAGTACAATATCCCATCTAGGGCAGCATAATTCGAAGGATT
TAAAGAGCACCCACCATGAAAACACTTGAAACACGACTTGTGATAACTTTGGTTCTCCACTGTCACCTTCTCAAGTGGATAAGCCGTTTTACCGC
AGGTGGCACATTTTTCCTGTGTCCCAAAAAACATGCCGGCAGCTTTGCTTGGAGATTTTGTCAGCATTGGAGTTAACTTCTCAGCTGACTTCACA
GGGGATTGAAAGTTCTTATTGAAGTTGCCAGACTCCTTGTAAAGCTGCTCAAAATGAGGCTTGCAATACAAAACCCCTTCCATTG
GGATAAGTTTTCACAGTTGTGTAAATCAAATCACACAGTAAACAAAAATGGCACACCAATTGGAAATATACGGAAAAAAAGGGAGGAAACAAATA
TTAAAAAACCAAGCTCCCTGGATAAAATAGTTGATGGAAATATAGTTTAAAAATCTGGAACAGTTGCTGCTGGACGCTTCATTGAAGCAAACTTG
ATTAAATGATTGTAGCTGCCTTTCTCCTTGAAAAGCTGTGAAAAATGAGGTTTGCAGTACAATATCCCATCTAGGGCAGCATAATTCGAAGGATT
TAAAGAGCACCCACCATGAAAACACTTGAAACACGACTTGTGATAACTTTGGTTCTCCACTGTCACCTTCTCAAGTGGATAAGCCGTTTTACCGC
AGGTGGCACATTTTTCCTGTGTCCCAAAAAACATGCCGGCAGCTTTGCTTGGAGATTTTGTCAGCATTGGAGTTAACTTCTCAGCTGACTTCACA
GGGGATTGAAAGTTCTTATTGAAGTTGCCAGACTCCTTGTAAAGCTGCTCAAAATGAGGCTTGCAATACAAAACCCCTTCCATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E375900] | SGN-U575402 | Tomato 200607 | Build 2 | 37 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T188754 [Download][View] | Facility Assigned ID: FA0AAD3BF10FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0069 | Quality Trim Threshold: 14.5 |
Working
