EST details — SGN-E377552
| Search information |
| Request: 377552 | Match: SGN-E377552 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175091 | Clone name: TUS-20-H1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175091 is on microarray TOM1 spot ID 1-1-8.4.14.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C23942 [cLED-6-M13] | Trace: SGN-T50122 | EST: SGN-E233136 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175091 [TUS-20-H1] | Trace: SGN-T190052 | EST: SGN-E377553 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E377552 | Length: 610 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E377552 [] (trimmed)
CTCAATAGAATTTATTGGGGAATGAAACGAAAGAAATACATTTCCAAAAAAAATTAGAAAATTACAATTCGTAAAGATAAATATTTTAATTTAAT
AATCAACGTAAATGAGTATGAAATATAGCTAAAAATATTTTTTTCTCTATAATTAAAAATAACAATTAATTATTATATATTTCTACTCTGCCACC
ATGGATTCAATTACCACCTCAGCTTTGTTGGAAAATACTTTTCGATAAGAGAGAGATAGTATGGCTTGACTTTTTCCACATCAATTCGAACTTTA
CTCTTGCTATATAAATCATATTTATTAAAAATGTTGAGCCACTTCATGTTCTCTTTGTCCTCCTCATTCATCAAGTGTGTATATGCTCCTGATCT
ATGTAATGCATAGAAAGAGTGGTAACGTATGACAAATAAAGCAGCAGAAGGAAGAGTAGTTTTATTTTCCTTTGCAATTAAATACATATAATCAT
CATGTCCCCATGACATAACAACTTTGTCAAGTCCACAACCTTCTTCATATACACCATTTTTTGTATTATAAATATTGTTGTTGATGTCTGGATTT
TCCTTAAAATACTTGTGGGGAACAATTGATTCATCAAAAG
AATCAACGTAAATGAGTATGAAATATAGCTAAAAATATTTTTTTCTCTATAATTAAAAATAACAATTAATTATTATATATTTCTACTCTGCCACC
ATGGATTCAATTACCACCTCAGCTTTGTTGGAAAATACTTTTCGATAAGAGAGAGATAGTATGGCTTGACTTTTTCCACATCAATTCGAACTTTA
CTCTTGCTATATAAATCATATTTATTAAAAATGTTGAGCCACTTCATGTTCTCTTTGTCCTCCTCATTCATCAAGTGTGTATATGCTCCTGATCT
ATGTAATGCATAGAAAGAGTGGTAACGTATGACAAATAAAGCAGCAGAAGGAAGAGTAGTTTTATTTTCCTTTGCAATTAAATACATATAATCAT
CATGTCCCCATGACATAACAACTTTGTCAAGTCCACAACCTTCTTCATATACACCATTTTTTGTATTATAAATATTGTTGTTGATGTCTGGATTT
TCCTTAAAATACTTGTGGGGAACAATTGATTCATCAAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E377552] | SGN-U565448 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190051 [Download][View] | Facility Assigned ID: FA0AAD8CD01FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.913 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
