EST details — SGN-E391477
| Search information |
| Request: 391477 | Match: SGN-E391477 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185943 | Clone name: TUS-48-L5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185943 is on microarray TOM1 spot ID 1-1-4.4.7.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C73633 [cLER-5-I20] | Trace: SGN-T93175 | EST: SGN-E279666 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C185943 [TUS-48-L5] | Trace: SGN-T192556 | EST: SGN-E391230 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E391477 | Length: 555 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391477 [] (trimmed)
CGCATCATTATCGAATAATTAGGTACTCATAACCCCTAAACATAAACCGAATAGTACAAGACACAAAGAGTTTGTTGGAATTAAAACAAAAAAGA
AAAAAGACCTAAGTAGCATTTAAAAACAAAGTGTCCCTAAAGACAATTTTGTTCCTAATATGAAACTTAGTAGCCTTCTGGCTTGGAAGCAATGA
AACTGATACACTGCACTTGACGCACATTGTCGAATCCAATGATTCTGACCCATGCTTGTGGGTATGCCTTTTTAGCCTCTTGAACCTCAGCCAAC
ACTTGGGTTGCATCAGTGCACCCAAACATAGGCAACTTCCACATGGTCCAGTACCTTCCATCATAGTATCCTGGTGACTTGTTGTTCTCACGGTA
GACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACCCATCCATTTTTCAAAAGGTACTCAATTGCGGTAAGCAATTGCTCGTCAGACAAAT
CAGGAAGGTATGAGAGTGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAGCTAACTCTTCCCCCATTG
AAAAAGACCTAAGTAGCATTTAAAAACAAAGTGTCCCTAAAGACAATTTTGTTCCTAATATGAAACTTAGTAGCCTTCTGGCTTGGAAGCAATGA
AACTGATACACTGCACTTGACGCACATTGTCGAATCCAATGATTCTGACCCATGCTTGTGGGTATGCCTTTTTAGCCTCTTGAACCTCAGCCAAC
ACTTGGGTTGCATCAGTGCACCCAAACATAGGCAACTTCCACATGGTCCAGTACCTTCCATCATAGTATCCTGGTGACTTGTTGTTCTCACGGTA
GACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACCCATCCATTTTTCAAAAGGTACTCAATTGCGGTAAGCAATTGCTCGTCAGACAAAT
CAGGAAGGTATGAGAGTGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAGCTAACTCTTCCCCCATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E391477] | SGN-U578689 | Tomato 200607 | Build 2 | 989 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T192803 [Download][View] | Facility Assigned ID: FA0AAD36CF03FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0158 | Quality Trim Threshold: 12.5 |
Working
