EST details — SGN-E391485
| Search information |
| Request: 391485 | Match: SGN-E391485 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185997 | Clone name: TUS-48-N11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185997 is on microarray TOM1 spot ID 1-1-6.2.7.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C69873 [cLER-12-N3] | Trace: SGN-T94418 | EST: SGN-E283451 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E391485 | Length: 434 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E391485 [] (trimmed)
CTTAGTGAAATTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAATTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTC
ACCAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTGTTGGCTGAGGTTCAAGAGG
CTAAAAAGGCATACCCACAAGCATGGGTCAGAATCATTGGATTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAA
GGCTACTAAGTTTCATATTAGGAACAAAATTGTCTTTAGGGACACTTTGTTTTTAAATGCTACTTAGGTCTTTTTTTTTTTTTTTACAAACAAAG
CACCAAATCATTATCATATAATTAGGTACTCATAACTCCAAAGGGGGGGGGGGG
ACCAGGATACTATGATGGAAGGTACTGGACCATGTGGAAGTTGCCTATGTTTGGGTGCACTGATGCAACCCAAGTGTTGGCTGAGGTTCAAGAGG
CTAAAAAGGCATACCCACAAGCATGGGTCAGAATCATTGGATTCGACAATGTGCGTCAAGTGCAGTGTATCAGTTTCATTGCCTACAAGCCAGAA
GGCTACTAAGTTTCATATTAGGAACAAAATTGTCTTTAGGGACACTTTGTTTTTAAATGCTACTTAGGTCTTTTTTTTTTTTTTTACAAACAAAG
CACCAAATCATTATCATATAATTAGGTACTCATAACTCCAAAGGGGGGGGGGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E391485] | SGN-U578689 | Tomato 200607 | Build 2 | 989 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T192811 [Download][View] | Facility Assigned ID: FA0AAD36CG06RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
