EST details — SGN-E391676
| Search information |
| Request: 391676 | Match: SGN-E391676 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C177650 | Clone name: TUS-27-B16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177650 is on microarray TOM1 spot ID 1-1-1.2.6.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46844 [cLEI-13-N7] | Trace: SGN-T82658 | EST: SGN-E268597 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C177650 [TUS-27-B16] | Trace: SGN-T193001 | EST: SGN-E391675 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E391676 | Length: 488 bp (838 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E391676 [] (trimmed)
CAGATTAGATGCTGCCGTCGCCGTTCTCTATCTCCGCCAATGAAATCTCTCACTTCCACTGCAGCTCTACTTCTTTCTACTTCTCCGCCGTCTTT
ACGATCTTCTCTCTTACCAAGTCTTCGACCTCTTCTTTATCGAGCTCGCCTCCGCAACAAGCTTAATCTGAGAAGATTGGGAAATGGAACTTGCC
GGGCAGAGTTTGCAAACGATGTGCCTTACGCCGCTGCTATTGGTGCTTGCATTTTGAGCTCGTGGGTTTTCCCGACTACTTACACGGAGGAGGAC
GATGGTGAATCCACAATTGATTCTGCTGATGCGAGGTTTGCTGTCATGGCAATTATCAGCTTCATTCCGTATTTTAATTGGATGAGTTGGGTTTT
TGCGTGGTTGGATACTGGGAAACCACGTTATGCAGTTTATGCTCGTGGGGATTTGGCTCCATATTTAAGCAACAACCTGTCTCTAACACCAGAAG
ATAGCTTTCTACC
ACGATCTTCTCTCTTACCAAGTCTTCGACCTCTTCTTTATCGAGCTCGCCTCCGCAACAAGCTTAATCTGAGAAGATTGGGAAATGGAACTTGCC
GGGCAGAGTTTGCAAACGATGTGCCTTACGCCGCTGCTATTGGTGCTTGCATTTTGAGCTCGTGGGTTTTCCCGACTACTTACACGGAGGAGGAC
GATGGTGAATCCACAATTGATTCTGCTGATGCGAGGTTTGCTGTCATGGCAATTATCAGCTTCATTCCGTATTTTAATTGGATGAGTTGGGTTTT
TGCGTGGTTGGATACTGGGAAACCACGTTATGCAGTTTATGCTCGTGGGGATTTGGCTCCATATTTAAGCAACAACCTGTCTCTAACACCAGAAG
ATAGCTTTCTACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E391676] | SGN-U565729 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T193002 [Download][View] | Facility Assigned ID: FA0AAD15DA08RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
