EST details — SGN-E395108
| Search information |
| Request: 395108 | Match: SGN-E395108 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C181693 | Clone name: TUS-37-K3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181693 is on microarray TOM1 spot ID 1-1-6.3.12.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C21589 [cLED-34-I17] | Trace: SGN-T57329 | EST: SGN-E243555 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181693 [TUS-37-K3] | Trace: SGN-T196435 | EST: SGN-E395109 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E395108 | Length: 645 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E395108 [] (trimmed)
AATGAACTTTAGCTATAGCTTCTTCACTTTGTAAATTTTAAAAAAAATAACTCTTTTTTTTTTGGAGTGAATTAATTTAGAGATGGTGAGAACAC
CTTGCCACGACGAACATGGTCGTAAAAAGGGTACTTGGACACCTGAAGAAGATAGAAAATTAGCAGCTTATATTACTAAATATGGATCATGGAAT
TGGAGACAACTTCCCAAGTATGCTGGCTTAGCAAGGTGTGGAAAGAGTTGTAGACTTCGATGGATGAATTATTTAAGGCCAAATGTTAAAAGAGG
AAACTACACAAAAGAAGAAGATGAAATCATCTTGAACCTCCATGCTCAACTTGGAAATAAGTGGTCAACGATTGCAAGTCACTTGCCAGGAAGAT
CAGATAACGAGATAAAGAATCATTGGCACACAACAGTGAAGAAGCGCGCTGATTATAACTCAAGTGAAGGAAGCAAGAAATGCAATAATAAGAAG
AGTGAAAGTGATATTACTAAAAGAAAGAGTAATGTGGAAAATCAAAATGCAATTGGTGATAATAATAATAATAATAATACTATGCATGAAAATGT
AATATTGGAAAATTCAGAATGGTCATCAAGTGAAGACTTATCCTCTATTGATTATCAACAAGACATTTTTCCAGA
CTTGCCACGACGAACATGGTCGTAAAAAGGGTACTTGGACACCTGAAGAAGATAGAAAATTAGCAGCTTATATTACTAAATATGGATCATGGAAT
TGGAGACAACTTCCCAAGTATGCTGGCTTAGCAAGGTGTGGAAAGAGTTGTAGACTTCGATGGATGAATTATTTAAGGCCAAATGTTAAAAGAGG
AAACTACACAAAAGAAGAAGATGAAATCATCTTGAACCTCCATGCTCAACTTGGAAATAAGTGGTCAACGATTGCAAGTCACTTGCCAGGAAGAT
CAGATAACGAGATAAAGAATCATTGGCACACAACAGTGAAGAAGCGCGCTGATTATAACTCAAGTGAAGGAAGCAAGAAATGCAATAATAAGAAG
AGTGAAAGTGATATTACTAAAAGAAAGAGTAATGTGGAAAATCAAAATGCAATTGGTGATAATAATAATAATAATAATACTATGCATGAAAATGT
AATATTGGAAAATTCAGAATGGTCATCAAGTGAAGACTTATCCTCTATTGATTATCAACAAGACATTTTTCCAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E395108] | SGN-U582818 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T196434 [Download][View] | Facility Assigned ID: FA0AAD25AF02FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.930 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
