EST details — SGN-E395298
| Search information |
| Request: 395298 | Match: SGN-E395298 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C172991 | Clone name: TUS-14-P13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C172991 is on microarray TOM1 spot ID 1-1-4.4.20.8 [Order] [Tomato Microarray Database]
See unigene SGN-U575402 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C14438 [cLEC-7-O4] | Trace: SGN-T25281 | EST: SGN-E201999 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C172991 [TUS-14-P13] | Trace: SGN-T196625 | EST: SGN-E395299 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E395298 | Length: 650 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E395298 [] (trimmed)
AACAACACTCGTAAGGACTGCACAACTTTCCTGCCAAAGGTCATGATAAAAAGCAGGAACATTTAACATCCGAAAGTTAAAAAGGAACAACAACA
ACAACAACAACGAAAGGATAAGTTTTCACAGTTGTGTAAATCAAATCACACAGTAAACAAAAATGGCACACCAATTGGAAATATACGGAAAAAAA
GGGAGGAAACAAATATTAAAAGACCAAGCTCCCTGGATAAAATAGTTGATGGAAATATAGTTTAAAAATCTGGAACAGTTGCTGCTGGACGCTTC
ATTGAACCAAACTTGATTAAATGATTGTAGCTGCCTTTCTCCTTGAAAAGCTGTGAAAAATGAAGTTTGCAGTACAATATCCCATCTAGGGCAGC
ATAATTCGAAGGATTTAAAGAGCACCCACCATGAAAACACTTGAAACACGACTTGTGATAACTTTGGTTCTCCACTGTCACCTTCTCAAGTGGAT
AAGCCGTTTTACCGCAGGTGGCACATTTTTCCTGTGTCCCAAAAAACATGCCGGCAGCTTTGCTTGGAGATTTTGTCAGCATTGGAGTTAACTTC
TCAGCTGACTTCACAGGGGATTGAAAGTTCTTATTGAAGTTGCCAGACTCCTTGTAAAGCTGCTCAAAATGAGGCTTGCA
ACAACAACAACGAAAGGATAAGTTTTCACAGTTGTGTAAATCAAATCACACAGTAAACAAAAATGGCACACCAATTGGAAATATACGGAAAAAAA
GGGAGGAAACAAATATTAAAAGACCAAGCTCCCTGGATAAAATAGTTGATGGAAATATAGTTTAAAAATCTGGAACAGTTGCTGCTGGACGCTTC
ATTGAACCAAACTTGATTAAATGATTGTAGCTGCCTTTCTCCTTGAAAAGCTGTGAAAAATGAAGTTTGCAGTACAATATCCCATCTAGGGCAGC
ATAATTCGAAGGATTTAAAGAGCACCCACCATGAAAACACTTGAAACACGACTTGTGATAACTTTGGTTCTCCACTGTCACCTTCTCAAGTGGAT
AAGCCGTTTTACCGCAGGTGGCACATTTTTCCTGTGTCCCAAAAAACATGCCGGCAGCTTTGCTTGGAGATTTTGTCAGCATTGGAGTTAACTTC
TCAGCTGACTTCACAGGGGATTGAAAGTTCTTATTGAAGTTGCCAGACTCCTTGTAAAGCTGCTCAAAATGAGGCTTGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E395298] | SGN-U575402 | Tomato 200607 | Build 2 | 37 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T196624 [Download][View] | Facility Assigned ID: FA0AAD2CH07FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 14.5 |
Working
