EST details — SGN-E396915
| Search information |
| Request: 396915 | Match: SGN-E396915 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C184173 | Clone name: TUS-44-B11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184173 is on microarray TOM1 spot ID 1-1-6.2.16.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C22540 [cLED-38-I9] | Trace: SGN-T58124 | EST: SGN-E244512 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E396915 | Length: 660 bp (862 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E396915 [] (trimmed)
TTCTCTTTTAGTACCAAAAACTCAAATCCTTGAATACTCAAAGGACAAAAATAAAAAAAATTCAAAGTATGGGACGTTCACCTTGTTGTGAAAAA
GCACATACAAATAAAGGAGCATGGACTAAAGAAGAAGACCAACGCCTCATCAATTATATACGTGCTCATGGGGAAGGTTGCTGGCGTTCTCTTCC
TAAAGCTGCAGGATTGTCAAGATGTGGAAAGAGTTGCAAATTGAGATGGATAAATTATTTAAGGCCTGATCTCAAAAGAGGGAATTTTACAGAAA
AAGAAGATGAATTGATAATCAAACTTCATAGTTTGCTTGGAAACAAATGGTCAGTTATAGCCGGAAGATTACCTGGAAGAACAGATAACGAAATC
AAGAACTATTGGAATACACATATTAAACGAAAACTCATTAGTCGTGGCATTGATCCTCAAACTCACCGTCCACTCAACAACAACACCACTAACTC
CCACACCACCACCAATATCACCACCGCAGTCACAACCAAAAACATCAACTTGGATTTCACAAACGTTGACCAAAAACAACCCAATATTATGATTG
CCACGTCATCGTCATATGATGAAACAAAATGCAACAGTGGTACAACTGAGGAAACAAAGCCCCTAGAAATTATTAATCCAAAAATACCCT
GCACATACAAATAAAGGAGCATGGACTAAAGAAGAAGACCAACGCCTCATCAATTATATACGTGCTCATGGGGAAGGTTGCTGGCGTTCTCTTCC
TAAAGCTGCAGGATTGTCAAGATGTGGAAAGAGTTGCAAATTGAGATGGATAAATTATTTAAGGCCTGATCTCAAAAGAGGGAATTTTACAGAAA
AAGAAGATGAATTGATAATCAAACTTCATAGTTTGCTTGGAAACAAATGGTCAGTTATAGCCGGAAGATTACCTGGAAGAACAGATAACGAAATC
AAGAACTATTGGAATACACATATTAAACGAAAACTCATTAGTCGTGGCATTGATCCTCAAACTCACCGTCCACTCAACAACAACACCACTAACTC
CCACACCACCACCAATATCACCACCGCAGTCACAACCAAAAACATCAACTTGGATTTCACAAACGTTGACCAAAAACAACCCAATATTATGATTG
CCACGTCATCGTCATATGATGAAACAAAATGCAACAGTGGTACAACTGAGGAAACAAAGCCCCTAGAAATTATTAATCCAAAAATACCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E396915] | SGN-U583772 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T198241 [Download][View] | Facility Assigned ID: FA0AAD32CA06RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
