EST details — SGN-E397887
| Search information |
| Request: 397887 | Match: SGN-E397887 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C180362 | Clone name: TUS-34-C16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180362 is on microarray TOM1 spot ID 1-1-1.3.19.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C28788 [cLEF-49-D3] | Trace: SGN-T62579 | EST: SGN-E249071 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E397887 | Length: 654 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E397887 [] (trimmed)
CACAAAATCCATATTTACACAACAAAAAAAATTTAAGTTTGATGGATAAATTAATCAATCAAGAAAATAATATTGATAAAGAAATTATGGAGCTT
AGAAGAGGTCCATGGACTGTTGAAGAAGATTTAGTTCTTATGAATTATATTTCTCATCACGGTGAAGGTCGTTGGAATTCACTCTCACGTTGTGC
TGGTTTGAAGAGGACAGGAAAAAGTTGCAGGCTAAGATGGCTTAATTATCTTCGACCAAATGTTCGACATGGAAATATTACGCTTGAAGAACAAC
TCTTGATTCTTCAACTTCATTCTCGTTGGGGCAATAGGTGGTCAAAAATCACGCAACATTTGCCAGGGAGAACTGATAACGAGATCAAAAATTAT
TGGAGAACTCGGGTTCAAAAACATGCGAAACAACTAAAATGCGATGTGAATAGCAGACAATTCCAAGATACATTACGTTATCTTTGGATTCCAAG
ACTAGTTGAGAGGATTGAAGCATCCAAAATTTCGAATTATAATTGTATTAACGAAGCTCAACAATCCATTATGAGAACACATATTAATAATAATT
TTAGCACTAGCGTTACACTAGAAAATTCCCGCGTGGCAACTTCATCAAAAAACTCTAATCAAGATTATAATCAAGTTAATCAAA
AGAAGAGGTCCATGGACTGTTGAAGAAGATTTAGTTCTTATGAATTATATTTCTCATCACGGTGAAGGTCGTTGGAATTCACTCTCACGTTGTGC
TGGTTTGAAGAGGACAGGAAAAAGTTGCAGGCTAAGATGGCTTAATTATCTTCGACCAAATGTTCGACATGGAAATATTACGCTTGAAGAACAAC
TCTTGATTCTTCAACTTCATTCTCGTTGGGGCAATAGGTGGTCAAAAATCACGCAACATTTGCCAGGGAGAACTGATAACGAGATCAAAAATTAT
TGGAGAACTCGGGTTCAAAAACATGCGAAACAACTAAAATGCGATGTGAATAGCAGACAATTCCAAGATACATTACGTTATCTTTGGATTCCAAG
ACTAGTTGAGAGGATTGAAGCATCCAAAATTTCGAATTATAATTGTATTAACGAAGCTCAACAATCCATTATGAGAACACATATTAATAATAATT
TTAGCACTAGCGTTACACTAGAAAATTCCCGCGTGGCAACTTCATCAAAAAACTCTAATCAAGATTATAATCAAGTTAATCAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E397887] | SGN-U576251 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T199213 [Download][View] | Facility Assigned ID: FA0AAD22BB08RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0121 | Quality Trim Threshold: 14.5 |
Working
