EST details — SGN-E260726
| Search information |
| Request: 260726 | Match: SGN-E260726 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C40531 | Clone name: cLEG-54-D22 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C188437 [TUS-55-D3] | Trace: SGN-T352351 | EST: SGN-E551476 | Direction: 5' | Facility: Giovanni |
| Sequence |
| Sequence Id: SGN-E260726 | Length: 800 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E260726 [] (trimmed)
TTAAAGTGATACTTTTCTCTCTCGTGGTTGAAATAACATTTCAGAAAGGTTTAGAGGTAAACTGTGACCTTTTTCTTTGGGGTTGTGACAGATCA
GCTGGTCCGATCTGGGGTTCAGATAATTTAGCTGAAGAAAGTGCAGATAGTGCTTTGCTTTGCTGCATTCTGTAATGTCTGTGAAGTTATCTTAC
AGATTACTGTTTGCTGAAGCCTTATGCTCAATTGTCTCATGCCTTCTGCATTCCAGTGAGAACCAACATCTATAGATGTAAGAGCTGGTGTATTA
TGTGTGATACCTCTACAGATATGACTTGATGGACCTGGGATCTTCTTTTTGTCCTGGTCTACTGTATCTTTGATATAGTAATATCTGATTCATTC
TGATCTAAATAAGCCACCCAGTGTCTGTACTTAACATACATTTGTACGGGTTCCCTGGTATTCAGAACTTCAATCATGAACTTTGTTAATTTCTG
AGCAGAGTCGCTGGAAATAAAAAATAATTAGCAATTTCTGAGGACTGGTAATTCATACTGAAATTTAACTTTTGCTATCTCTACAGGATGGTAAT
AAGCCAATACATGTTGCAGCTACAACAGGCAATCGGGCAGCTGTTGAAGCTTTATTGGCCGTCACCCACAGATTCAGAGTGTTCCTGAATGGAGT
GTGGATGGAGTCATTGAGTTTATGCAATCTGATTATAGGAGAAAACAGGGAAGTATAGAAGCTGGGGGAGAAGAAACTATGGCGCTATTCTAAGA
TGTCTACGTACGAGGCTGGAGGATGAATTCAAGGGCTTGA
GCTGGTCCGATCTGGGGTTCAGATAATTTAGCTGAAGAAAGTGCAGATAGTGCTTTGCTTTGCTGCATTCTGTAATGTCTGTGAAGTTATCTTAC
AGATTACTGTTTGCTGAAGCCTTATGCTCAATTGTCTCATGCCTTCTGCATTCCAGTGAGAACCAACATCTATAGATGTAAGAGCTGGTGTATTA
TGTGTGATACCTCTACAGATATGACTTGATGGACCTGGGATCTTCTTTTTGTCCTGGTCTACTGTATCTTTGATATAGTAATATCTGATTCATTC
TGATCTAAATAAGCCACCCAGTGTCTGTACTTAACATACATTTGTACGGGTTCCCTGGTATTCAGAACTTCAATCATGAACTTTGTTAATTTCTG
AGCAGAGTCGCTGGAAATAAAAAATAATTAGCAATTTCTGAGGACTGGTAATTCATACTGAAATTTAACTTTTGCTATCTCTACAGGATGGTAAT
AAGCCAATACATGTTGCAGCTACAACAGGCAATCGGGCAGCTGTTGAAGCTTTATTGGCCGTCACCCACAGATTCAGAGTGTTCCTGAATGGAGT
GTGGATGGAGTCATTGAGTTTATGCAATCTGATTATAGGAGAAAACAGGGAAGTATAGAAGCTGGGGGAGAAGAAACTATGGCGCTATTCTAAGA
TGTCTACGTACGAGGCTGGAGGATGAATTCAAGGGCTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E260726] | SGN-U570035 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T75344 [Download] [View] | Facility Assigned ID: TBFIH23TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
