EST details — SGN-E271463
| Search information |
| Request: 271463 | Match: SGN-E271463 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64137 | Clone name: cLEM-5-D6 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177855 is on microarray TOM1: SGN-S1-1-4.3.6.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177855 [TUS-27-K5] | Trace: SGN-T182879 | EST: SGN-E371371 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271463 | Length: 510 bp (621 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E271463 [] (trimmed)
GCAAAAATCCAATAATTTTTTTTATATATATTTTTATTTTATCAATCAATTTTGATGGATAAATTAATTAATCAAGAAAATTATATTGATGAAGA
AATCATGGAGCTTAGAAGAGGTCCATGGACTGTCGAAGAAGATTTTATTCTTATGAATTATATTTCTCACCATGGTGAAGGTCGTTGGAACTCCC
TCTCACGTTGTGCTGGTTTAAAGAGGACAGGAAAAAGCTGTCGACTAAGATGGCTTAATTATCTTAGACCAAATATTCGACATGGAAATATTACA
CTTGAAGAACAACTTTTAATTCTTCAACTTCATTTTCGTTGGGGCAATAGGTGGTCAAAAATTGCGGAACATTTGCCAGGAAGAACGGATAATGA
GATTAAAAATTACTGGAGAACTCGAGTTCAAAAACATGTGAAACAACTAAAGTGCGATGTGAATAGCAAACAATTCAAAGATACATTACGTTATC
TTTGGATTCCAAGACTAGTTGAGAGGATTGAAGCA
AATCATGGAGCTTAGAAGAGGTCCATGGACTGTCGAAGAAGATTTTATTCTTATGAATTATATTTCTCACCATGGTGAAGGTCGTTGGAACTCCC
TCTCACGTTGTGCTGGTTTAAAGAGGACAGGAAAAAGCTGTCGACTAAGATGGCTTAATTATCTTAGACCAAATATTCGACATGGAAATATTACA
CTTGAAGAACAACTTTTAATTCTTCAACTTCATTTTCGTTGGGGCAATAGGTGGTCAAAAATTGCGGAACATTTGCCAGGAAGAACGGATAATGA
GATTAAAAATTACTGGAGAACTCGAGTTCAAAAACATGTGAAACAACTAAAGTGCGATGTGAATAGCAAACAATTCAAAGATACATTACGTTATC
TTTGGATTCCAAGACTAGTTGAGAGGATTGAAGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271463] | SGN-U588972 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85268 [Download] [View] | Facility Assigned ID: TGFAT15TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.938 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |
Working
