EST details — SGN-E297177
| Search information |
| Request: 297177 | Match: SGN-E297177 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C84605 | Clone name: cLET-29-I14 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191144 [TUS-62-D22] | Trace: SGN-T342320 | EST: SGN-E541445 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191144 [TUS-62-D22] | Trace: SGN-T342323 | EST: SGN-E541448 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E297177 | Length: 584 bp (1029 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E297177 [] (trimmed)
GGAACTTTTGTAACTTCCAGTCCTAGTGCTTGGATCTTACTGCGCAACTCCACTTCTTCTTGATTAGTCAATGATTCCACCCCACCAGCAGGAAC
ATACAACTACTGGGCTGACAATTACACATTGTTTGTTCTTGAAATGGCACTCATGGGCTTTGCTGAGCACAGGAGATTCCAAGATTGGGCCAAAC
CTGGTTCAATGGGGAAACAATACTTCTTGGGTCTTGAAAAGGGTTTGGGTGGGTCAGGTGATCCAGCATACCCAGGTGGCCCATTGTTTAATCCA
CTTGGATTTGGAAAAGATGAAAAGTCTATGAAGGAATTGAAGCTTAAGGAGATTAAGAACGGAAGACTTGCTATGTTGGCTGTTTTGGGATACTT
TATTCAAGCATTGGTTACTGGTGTTGGACCTTACCAAAACCTTCTTGATCATTTGGCTGATCCAGTAAACAACAATGTCTTGACTAGTCTCAAGT
TTCACTAAACTAAGTAGAGCAAAAGCAATCCACTCTTTCTTCTAAATCTCCCCCCCTCCCCTTCTCTTATGTGTAATGTAACATTATGTGCAGAT
AATATTTTTCATCT
ATACAACTACTGGGCTGACAATTACACATTGTTTGTTCTTGAAATGGCACTCATGGGCTTTGCTGAGCACAGGAGATTCCAAGATTGGGCCAAAC
CTGGTTCAATGGGGAAACAATACTTCTTGGGTCTTGAAAAGGGTTTGGGTGGGTCAGGTGATCCAGCATACCCAGGTGGCCCATTGTTTAATCCA
CTTGGATTTGGAAAAGATGAAAAGTCTATGAAGGAATTGAAGCTTAAGGAGATTAAGAACGGAAGACTTGCTATGTTGGCTGTTTTGGGATACTT
TATTCAAGCATTGGTTACTGGTGTTGGACCTTACCAAAACCTTCTTGATCATTTGGCTGATCCAGTAAACAACAATGTCTTGACTAGTCTCAAGT
TTCACTAAACTAAGTAGAGCAAAAGCAATCCACTCTTTCTTCTAAATCTCCCCCCCTCCCCTTCTCTTATGTGTAATGTAACATTATGTGCAGAT
AATATTTTTCATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E297177] | SGN-U581495 | Tomato 200607 | Build 2 | 193 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T109592 [Download] [View] | Facility Assigned ID: TMEEJ55TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0137 | Quality Trim Threshold: 12.5 |
Working
