Sol Genomics Network

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SGN Marker CT205

SGN-M110

Synonyms

None

Locus associations

None

RFLP details

Insert size

1700

Vector

pBLUESC

Cutting Site

EcoR1

Drug Resistance

AMP

Image

CT205 RFLP image

Forward sequence

not available

Reverse sequence

CTTTTTTTTTTTTTTTAAAAATTGAAGGGAGAATCTTGTTTGCTCAAATAAAAGCTCCAAAGTTCTTGATAACTTCAAATGCAAGGTAAT
TAAAAAGCATAATGGATGATTCTCCTTGTCAAAGTTAAACTAACTTCAGGGGGTCATTTGTTCACTTCTTCCTCTTCTTTGGAGGCTGGA
TAGCTTCTTCTTCTTCATCCTCTTCATCATCATCTTCTGGATCGTCGTCCTCTACGACTTCTTCTTCACCCTCTCCTTCTTCAGCTTCTT
CATCATCATCATTATCATCGTCGCCATCATCGTCGTCGTCACCGTCATCATCATGACCTTCTTCACCAACATCCTCTTCATCTTCTGCAT
CTCCGTTCTCCTCACCTTCTCCATTGCTTTTCTTGGCATTTCCTTTGCTTTTGTTTCCATGAACCCCTTC

RFLP sequence matches to unigenes

Unigene	e value	Match length (bp)	Strand
SGN-U149778	2e-09	67 (15.6% of RFLP seq)	-
SGN-U149145	3.5e-54	106 (24.7% of RFLP seq)	-
SGN-U149145	1e-140	255 (59.3% of RFLP seq)	-

Mapped locations

Map: Tomato-EXPIMP 2009
Map version 126 (location: 53459)
Chromosome 2
Position 10.22 cM
Confidence uncalculated
Protocol RFLP

Tomato-EXPIMP 2009

Map: Sun1642 x LA1589
Map version 85 (location: 43644)
Chromosome 2
Position 31.70 cM
Confidence uncalculated
Protocol RFLP

Sun1642 x LA1589

Map: Yellow Stuffer x LA1589
Map version 83 (location: 43504)
Chromosome 2
Position 10.50 cM
Confidence uncalculated
Protocol RFLP

Yellow Stuffer x LA1589

Map: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589
Map version 79 (location: 43044)
Chromosome 2
Position 22.50 cM
Confidence uncalculated
Protocol RFLP

Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589

Map: Tomato-EXPIMP 2008
Map version 55 (location: 40747)
Chromosome 2
Position 17.00 cM
Confidence uncalculated
Protocol RFLP

Tomato-EXPIMP 2008

Map: Tomato-EXPEN 2000
Map version 52 (location: 39013)
Chromosome 2
Position 13.00 cM
Confidence CF(LOD3)
Protocol RFLP
Subscript A

Tomato-EXPEN 2000

Map: Tomato-EXPEN 2000
Map version 52 (location: 39014)
Chromosome 5
Position 47.00 cM
Confidence I
Protocol RFLP
Subscript B

Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992
Map version 28 (location: 8133)
Chromosome 2
Position 16.20 cM
Confidence I(LOD2)
Protocol RFLP

Tomato-EXPEN 1992

Map: Tomato-EXPIMP 2001
Map version 26 (location: 8138)
Chromosome 2
Position 14.00 cM
Confidence F(LOD3)
Protocol RFLP

Tomato-EXPIMP 2001

Overgo hybridization and physical mapping

CT205 was used as an overgo probe on plate 15 [well F10]

Plausible BAC Matches: None

Overgo Sequences

Related Markers

Related Genotyped Markers: These markers have been genotyped and share a name with this marker

Genomic location of CT205

%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D110 marker 110

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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