Sol Genomics Network

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SGN Marker TG608

SGN-M144

Synonyms

None

Locus associations

None

RFLP details

Insert size

1700

Vector

pGEM4Z

Cutting Site

PST1

Drug Resistance

AMP

Image

TG608 image not available

Forward sequence

AGTTTGTTTGCCATAGGTAAGTGGTCTCTCTTACCTACTGACACTGAAATAGCACATGTATTTTTGAGAGCCTACATGGTAACAACTCAT
CTGCATCCAGAATTTGTTGTACTTTCTCCTAAATTATGCAAATAGCAGCTCGAGCTATGCAAGTTCAATCCCATATTTGGTTGCTCTACC
ATCTTTTTTCAATTGCAGGAATCCCAGGTGCCTTTACTTTGTTTTACATATATGAAAAGAAAGAGGAAGAAATAGATCATGTACTTCAAG
ATATTGTCTTATTTACATGGAAGTTGAAGTCTGATATTTCTGGGAAAATTTTCAGCTCTACAAAAAAGGACCGATAATAGACAGCAAATT
ACCTGTTCAAACTTCTTCCTTATCTTGAGAAGCTTTCTTAAGCAGGTTGTTGAAGTTCAAGGACTTCACACTTATCCTTGTGTGTAACAT
ATTAATGGGAACCTTGCTGAAAGCC

Reverse sequence

CTATAGTTTTGCTGGCTCAAAATTAGAATAGTTACTTGTAAATGAATAAAAAATCCATGAAAAATGTTAAAATTTAGTGAGTGATGTTCA
CTAGAATATCATACGAACTTCAAAATTCCAAATTCCTAAAATATGAACAAGAAAATAAGAGAAAATGTTCATTAGAGTAGTGTACGAAGA
ACTTTACTGGTCTTAATAAATAATAAGGAATAGTAATCTCGAATTAAAATGTAAAATTATTTTATCCTATTTTTGTTTAGGAGTTTTAGT
TAGTTTCAGAATTGTTTATCCTATCAACCTGTATGTGTATATATGGAATAACTACTCTCATGAGATATCTCAATTCATTGAATAATGAAA
TGAATAAATCTTCTCAAACGAAAATAATATTGACAAACTAAACTTTTAACGAATGATGAGTTTTTCTCATTAGTGTTAGGCAAGTGGAAG
AAGAAGAAAATAAAAATAAAAATGAAATTTTAAGTGGATATTTTTCA

RFLP sequence matches to unigenes

Unigene	e value	Match length (bp)	Strand
SGN-U156951	2e-157	279 (58.7% of RFLP seq)	+

Mapped locations

Map: Tomato-EXPIMP 2009
Map version 126 (location: 53574)
Chromosome 2
Position 1.44 cM
Confidence uncalculated
Protocol RFLP

Tomato-EXPIMP 2009

Map: Sun1642 x LA1589
Map version 85 (location: 43884)
Chromosome 2
Position 45.00 cM
Confidence uncalculated
Protocol RFLP

Sun1642 x LA1589

Map: Yellow Stuffer x LA1589
Map version 83 (location: 43623)
Chromosome 2
Position 1.60 cM
Confidence uncalculated
Protocol RFLP

Yellow Stuffer x LA1589

Map: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589
Map version 79 (location: 43346)
Chromosome 2
Position 12.70 cM
Confidence uncalculated
Protocol RFLP

Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589

Map: Tomato-EXPIMP 2008
Map version 55 (location: 40891)
Chromosome 2
Position 0.00 cM
Confidence uncalculated
Protocol CAPS

Tomato-EXPIMP 2008

PCR data Exp. ID 36591

Forward primer (5'-3')

TCCCAGGTGCCTTTACTTTG

Accessions and product sizes

Approximate temperature

Unknown

Reverse primer (5'-3')

TTTTGCTGGCTCAAAATTAGAA

Digested band sizes (using BsaHI)

Solanum pennellii TA56

1600

Solanum lycopersicum TA209

900

Mg⁺² concentration

1.5mM

Enzymes

Map: Tomato-EXPEN 1992
Map version 28 (location: 8296)
Chromosome 2
Position 0.00 cM
Confidence I(LOD2)
Protocol RFLP

Tomato-EXPEN 1992

Map: Tomato-EXPIMP 2001
Map version 26 (location: 8297)
Chromosome 2
Position 0.00 cM
Confidence F(LOD3)
Protocol RFLP

Tomato-EXPIMP 2001

Overgo hybridization and physical mapping

TG608 was used as an overgo probe on plate 15 [well H6]

Plausible BAC Matches: None

Overgo Sequences

Related Markers

Related Genotyped Markers: These markers have been genotyped and share a name with this marker

Genomic location of TG608

%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D144 marker 144

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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