SGN Marker T1506
SGN-M2053
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TPTAX29TH
Arabidopsis best BAC match: AC011765.4
Arabidopsis position: 1.1407000
Arabidopsis identities: 0.769
Best GenBank protein hit: AAF15934.1
Evalue: 2.6e-55
Identities: 0.769
Description: unknown protein; 89701-90979 [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTAX29TH
Arabidopsis best BAC match: AC011765.4
Arabidopsis position: 1.1407000
Arabidopsis identities: 0.769
Best GenBank protein hit: AAF15934.1
Evalue: 2.6e-55
Identities: 0.769
Description: unknown protein; 89701-90979 [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1506 was used as an overgo probe on plate 2 [well A11]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GTCCGGTGAACAATTCGGATAAGG
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B sequence
CCAAACACCACCAAGTCCTTATCC
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AB sequence
GTCCGGTGAACAATTCGGATAAGGACTTGG
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Marker sequence
GGCCTGGTTTAGGTTACTCTGATAGACCTAAGCTTGATTACAATGCTGAT
GTTATGGAAAAGTTTTTGGTAGACTTCATCAATGCTCCTGATAGTCCGGT GAACAATTCGGATAAGGACTTGGTGGTGTTTGGAGGAGGACATGCTGCTA CCTTAGCAGTTCGTGCTGCAAAGAAGGGCTTGGTTAAGCCAAAAGCAATT GCTTCTATTGCTCCCACCTGGGCTGGTCCACTTCCTATTGTTTTTGGAAG AGATTCCAGCATGGAAACAAGGTATGGTTTCCTTAGAGGGACCTTAAGGG CCCCTGCTGTTGGTTGGATGATGTATAATGTACTTGTTAGCAATGAGAAA TCAATAACATCACAATATAAGTCCCATGTTTATGCTGACCCT |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1506
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| User comments |
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