SGN Marker TG354

SGN-M206

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1450
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG354 image not available
Forward sequence
CTCACTATAGGGAGACAGCTTGCATGCCTGCAGCGACTCATATTTGGCTTTGAGTTTCAAGTATTCCCTATAGCTGCTTTGCTGCAATGG
CTCACAAGATGGATCAATAACTTGAAAAGGGTCTATATATATAAAAAAAAAAATTCTTCCTTTATTTGCGAAAAAAATTCGATCAGAAAA
AATTGTGATCGAGCAGCATTCGATCATGTCAGAAATTAAAGCAACTAACTTACATATAGTAAGTTATATTATGGTAAAAATCATACATAC
GTTCATCCTTTGAAAAGGTGACGTCAACGAAATTAGTAGCATTTGTTACCTCATTATCTTTGATTGATCGATTGACTTCCAATGTTCCAT
AGCTGCACTTTTGGTACCTATCAAGTGTTTTGAGCATACTGTTGCACAAGATAAATAAGAAGGAAAAAGTTATTAATACTCAAATGATTG
GATTGAATCAAATATGAGCAAGTATAAATAAATATTCGATCCATCTTTATTTAACACGGATAAAAAAATGTGCTAGCTCGCAACTCTTTT
TATTTTAAAAAAAAAAAC
Reverse sequence
CTCACTATAGGGAGACAGCCTGCATGCCTGCAGCGACTCATATTTGGCTTCGAGTTTCAAGTATTCCCTATAGCTGCTTTGCTGCAATGG
CTCACAAGATGGATCAATAACTTGAAAAGGGTCTATATATATAAAAAAAAAAATTCTTCCTTTATTTGCGAAAAAAATTCGATCAGAAAA
AATTGTGATCGAGCAGCATTCGATCATGTCAGAAATTAAAGCAACTAACTTACATATAGTAAGTTATATTATGGTAAAAATCATACATAC
GTTCATCCTTTGAAAAGGTGACGTCAACGAAATTAGTAGCATTTGTTACCTCATTATCTTTGATTGATCGATTGACTTCCAATGTTCCAT
AGCTGCACTTTTGGTACCTATCAAGTGTTTTGAGCATACTGTTGCACAAGATAAATAAAAAGGAAAAAGTTATTAATACTCAAATGATTG
GATTGAATCAAATATGAGCAAGTATAAATAAATATTCGATCCATCTTTATTTAACACGGATAAAAAAATGTGCTAGCTCGCAACTCTTTT
TATTTTAAAAAAAAAAACATTTTGCCT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1442423.2e-2456 (10.0% of RFLP seq)+
SGN-U1442421.5e-3884 (15.1% of RFLP seq)+
SGN-U1442427.8e-2256 (9.9% of RFLP seq)-
SGN-U1442421.5e-3884 (14.8% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 8578)
Chromosome
2
Position
97.90 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG354 was used as an overgo probe on plate 16 [well H6]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
ACTATAGGGAGACAGCTTGCATGC
B sequence
ATATGAGTCGCTGCAGGCATGCAA
AB sequence
ACTATAGGGAGACAGCTTGCATGCCTGCAG
Marker sequence
CTCACTATAGGGAGACAGCTTGCATGCCTGCAGCGACTCATATTTGGCTT
TGAGTTTCAAGTATTCCCTATAGCTGCTTTGCTGCAATGGCTCACAAGAT
GGATCAATAACTTGAAAAGGGTCTATATATATAAAAAAAAAAATTCTTCC
TTTATTTGCGAAAAAAATTCGATCAGAAAAAATTGTGATCGAGCAGCATT
CGATCATGTCAGAAATTAAAGCAACTAACTTACATATAGTAAGTTATATT
ATGGTAAAAATCATACATACGTTCATCCTTTGAAAAGGTGACGTCAACGA
AATTAGTAGCATTTGTTACCTCATTATCTTTGATTGATCGATTGACTTCC
AATGTTCCATAGCTGCACTTTTGGTACCTATCAAGTGTTTTGAGCATACT
GTTGCACAAGATAAATAAGAAGGAAAAAGTTATTAATACTCAAATGATTG
GATTGAATCAAATATGAGCAAGTATAAATAAATATTCGATCCATCTTTAT
TTAACACGGATAAAAAAATGTGCTAGCTCGCAACTCTTTTTATTTTAAAA
AAAAAAAC
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG354  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D206 marker 206
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)