SGN Marker TG526
SGN-M286
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
1700
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
|
Forward sequence
AAGCGCAAGGAGATTGTTCATTGCGTTACCCTTCACGAAATCGATGTCATAAATAGCAGGTATTAATTTGCTGCTAATGTTATGTGTTTA
TGGAAAGAAATGATTTTTTTGATTCCTTGTAGCTCGATTATCATATTGTTTTGTTGCAGCTTCTGTTTGTTGTTTTGTTATTATCTGTTG ATACTTGTTCTCCCCTTACTTCTTTTTCTGGACTGCTTTGGACTGTTTTTCCTTGAGCTGACAGGACTACACTTGTTGTGTTGTTGGAAA GGAATGATTTTGATTTATCTATGATTGCTTACTTAATTGTTCCTTTCTGCATTACCCTAGGTAATTGTTCTTTAATAGGAATAAGAGTAA GTGTCAACGGCTACTCTGTGCTGTTTTGTTATTATCGGTTGATTCTTGTAATTCTGTTGCTTTTATTTCTGAACTGCTTTGGAGTGCTTT TCCTTGAGGCGATTGTCTATGGAAACAACCTCCTTACCTTTGAGGTAG |
|
Reverse sequence
GGAGACAAGCTTGCATGCCTGCAGAAGTGATAAGATGGATGGCGTATCTCAAAGAAGTATTAACCCCGATCTTGGTCAATAAAACTTTTG
CATCCTCAGACATTTCTACATCCTCCTCTTGGCATCTGATGTCCAGGATTTTGCGAATTTCTTCCTCTTTGTAAGGTTGTGTAGAGATGA TGAGCAGGCGATCAAGAAAGTCAATTGGAATCCCGTGTGGGGATCTGTAGTTTGTTCCCCGGATTGTAGTAATGCCTCTATTTGTAGCAA CAACCAATATAGGTGCCATGTCATTCTCCAGAGCTCGGTTTAGGAAAGAGAAACACTCAATGTCAAGCATATGTACTTCGTCAATGAAGA GGACACCGGGCACAATCTCTGCCTTCCCTTCCTCCCTCCACTCAGCAACCTTGGTATCTATTTGTTCTCTCACTTCAGCACGAATCTCAC CAGTATCACCCGTAAATAGTGCTAAAAATCCCTGTGTTCTGAAATTGAGATGAGCTGATTAACATATTTAATCTAGTGAAGTAGGAAACA AGG |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U164163 | 1e-137 | 302 (55.6% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato QTL map |
|  Potato meta-QTL consensus map |
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG526 was used as an overgo probe on plate 3 [well C10]
Plausible BAC Matches: None
Non-Plausible BAC matches
P302D18,
P039I12,
P060P18,
P288D21,
P102F18,
P103A03,
P181H03,
P236A04,
P234I17,
P213J10,
P118F10,
P120A07,
P288I17,
P309M23,
P103D18,
P177B17,
P238D24,
P151D16,
P317F17,
P060L11,
P062N06,
P212O06,
P331B12,
P109F16,
P208F09,
P099P06,
P084A16,
P058J20,
P286L06,
P172E16,
P104A16,
P185C01,
P051O04,
P066C10,
P246N16,
P218F09,
P032K04,
P324C07,
P024G19,
P288H18,
P203L23,
P156P18,
P031M05,
P079P08,
P281L02,
P074N01,
P107O13,
P066I10,
P217N10,
P336E06,
P100L22,
P288J18,
P070P03,
P105P07,
P075D23,
P111L01,
P313H05,
P084C19,
P174K10,
P240D09,
P204J08,
P288I18,
P235G07,
P035H10,
P073F23,
P174D19,
P176P02,
P280K10,
P217G24,
P298P15,
P203E19,
P190J03,
P224C01,
P113G22,
P315C24,
P252C11,
P316F11,
P030G20,
P163N19,
P120K04,
P111P20,
P162H17,
P284P01,
P110K24,
P299K17,
P044D05,
P241K10,
P016A20,
P173M07,
P024G18,
P102G11,
P116D01,
P260D03,
P118F01,
P203K13,
P252N07,
P020N01,
P176B05,
P160L07,
P334K18,
P217A24,
P231D07,
P162E12,
P176N14,
P092G24,
P151H12,
P160G23,
P273G22,
P149H19,
P217B17,
P250F23,
P010F15,
P251N22
Overgo Sequences
|
A sequence
TGGACTGCTTTGGACTGTTTTTCC
|
|
B sequence
AGTCCTGTCAGCTCAAGGAAAAAC
|
|
AB sequence
TGGACTGCTTTGGACTGTTTTTCCTTGAGC
|
|
Marker sequence
AAGCGCAAGGAGATTGTTCATTGCGTTACCCTTCACGAAATCGATGTCAT
AAATAGCAGGTATTAATTTGCTGCTAATGTTATGTGTTTATGGAAAGAAA TGATTTTTTTGATTCCTTGTAGCTCGATTATCATATTGTTTTGTTGCAGC TTCTGTTTGTTGTTTTGTTATTATCTGTTGATACTTGTTCTCCCCTTACT TCTTTTTCTGGACTGCTTTGGACTGTTTTTCCTTGAGCTGACAGGACTAC ACTTGTTGTGTTGTTGGAAAGGAATGATTTTGATTTATCTATGATTGCTT ACTTAATTGTTCCTTTCTGCATTACCCTAGGTAATTGTTCTTTAATAGGA ATAAGAGTAAGTGTCAACGGCTACTCTGTGCTGTTTTGTTATTATCGGTT GATTCTTGTAATTCTGTTGCTTTTATTTCTGAACTGCTTTGGAGTGCTTT TCCTTGAGGCGATTGTCTATGGAAACAACCTCCTTACCTTTGAGGTAG |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG526
|
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
