SGN Marker TG486
SGN-M360
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
1600
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG486 image not available
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Forward sequence
ATATATAAAATAAATCTAAAGAAAATTTGTTTTCATGCTCAATTGGTACACAAGTCCAATTCATTACCATCTACCTTTATGTCAGAAGAG
AAGTTTGTCACAATTTTGTTGTATCCAGCTTTCTTCAGTTGAAAATTCATCCATCTAAGCAAGATCTTTTCTGGAGGAAGGTTCATCAAC TCTTCTACATCCTGAGATCATAAAAGTGAGCTGAAGCACATAACACAAGCTTTTTGGAAGATAGTCACATGAACAAATCATTTTACGAGA TAATGTCCACTATACCTTGCTATCATCAACTAACTCCACCAATTGAGGTGTTTTCTTTAGATTGAGGTCTGCCAATAGTTGAATCTGAAA TCGCGTGATTAAAAAATCAATCTCCTTGGGAAATATAAGACTACAGTTTTGTGTCTTAATATATAAAATATATGGTGATACCATTTTGTA ACTTAATGCCGGCTGCTATTGGTAAGGTAATCTAGTCCTATAAAAAGTTGCT |
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Reverse sequence
GGAGACAAGCTTGCATGCCTGCAGCAAGAATGGGAAATAATGTCAAGAACTCATCAGCTTTCCTAAAGTCTCCAACTTCTACATTACTTC
ATACAATTAGTGAATCTGAGAAGGCATCATATGTTGCCCATATTAACAACTATCTGGTGAGAGATGAATTTTTGAAAAAATTCCTTCCTA TTGATCCTTCTACAAATGATCTCTTTGAGATTTCCAAGGATGGAGTTCTTATATGGTCAGCATCAGTCTCGCTTCTTGTACACATGTCTC AAGAGCTTGTAAATCCGTAGTCTGATTGTCAATTAAATTGCCCTTTGTTGCAGTAAGCTTATCAATGTGGCTGTGCCTGGAACAATTGAT GAACGAGCAATAAATATGAAGAGAATGCTTAATCCATGGGAAAGGAATGAAAATCATACTTTGTGCCTAAACTCTGCAAAGGCTATTGGA TGTACTGTGGTCAATATTGGGACACAAGACTTTATTGAAGGAAGGGTATGTGTCTCCTTATGAATTTCTGCTCATATATTTTGAC |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U149394 | 1e-14 | 72 (14.3% of RFLP seq) | + |
| SGN-U149394 | 1.8e-25 | 94 (18.7% of RFLP seq) | + |
| SGN-U171932 | 8e-34 | 72 (14.3% of RFLP seq) | + |
| SGN-U171932 | 1.8e-62 | 120 (23.9% of RFLP seq) | + |
| SGN-U159585 | 2.6e-12 | 148 (27.7% of RFLP seq) | - |
| SGN-U149394 | 3.8e-42 | 214 (40.0% of RFLP seq) | - |
| SGN-U171932 | 1.1e-54 | 107 (20.0% of RFLP seq) | - |
| SGN-U149394 | 4.6e-57 | 171 (32.0% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG486 was used as an overgo probe on plate 15 [well E8]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG486
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