SGN Marker TG640

SGN-M406

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
700
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG640 image not available
Forward sequence
ATGCTGGTTTACGAGTTTATGCCTAATGGTACTCTGAGAGACCACCTATCTGGTAAATAATTATATAATTCACATTGCTCTTGCCTCCAT
TTATTTGTGCAAATCTTTTCCTTCTAGCACTTTATTTTGATAAGGAAAATATTTAAGTATGCAAACGATTAACTAATCCACAACATCTAG
CTTTGTCCCCAACGAAATCCCTTCCGATGAAAATTGTCGAATATCAGTCTTTCTGCTGGTTAATGTTAGGGGATTGGTTTTGGGGGAAAG
CACTAGCAGAAATCAAGTCTTTGACCATATTATATGGGATTTAATGGGTTGACTTGTGGTGTGACAGGTAAATGTAAAGAACCTCTAAGT
TTTGCTATGCGATTGAAAGTTGCCTTAGGTTCCGCTAAGGGCATTCTATACTTGCACACGGAGGCTGATCCTCCCATATTCCATCGAGAT
ATCAAGGCAAGCAATATATTGCTAGACTCTAAGTTTATTGC
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGAGAACGAGCATTAGAGCCACAAGGTAGGATCACAAATATTTAGGTCAAAATATCCACTTCCTTGAAC
AATCAATGCTCACCGGAGTGCCCTTAACAACTGTCGATACATGAGCAGGCAGAGTCCCTTCAAGATCTGGAACTGGAGCAAGCCGTGAAA
GTCCAAAGTCAGCCACCTTTGCAATAAACTTAGAGTCTAGCAATATATTGCTTGCCTTGATATCTCGATGGAATATGGGAGGATCAGCCT
CCGTGTGCAAGTATAGAATGCCCTTAGCGGAACCTAAGGCAACTTTCAATCGCATAGCAAAACTTAGAGGTTCTTTACATTTACCTGTCA
CACCACAAGTCAACCCATTAAATCCCATATAATATGGTCAAAGACTTGATTTCTGCTAGTGCTTTCCCCCAAAACCAATCCCCTAACATT
AACCAGCAGAAAGACTGATATTCGACAATTTTCATCGGAAGGGATTTCGTTGGGGACAAAGCTAGATGTTGTGGATTAGTTAATC
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1732171.8e-2558 (11.8% of RFLP seq)+
SGN-U1732171.8e-62120 (24.4% of RFLP seq)+
SGN-U1732171.9e-62120 (22.4% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9091)
Chromosome
9
Position
54.40 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG640 was used as an overgo probe on plate 16 [well C2]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
CTTAGGTTCCGCTAAGGGCATTCT
B sequence
CTCCGTGTGCAAGTATAGAATGCC
AB sequence
CTTAGGTTCCGCTAAGGGCATTCTATACTT
Marker sequence
ATGCTGGTTTACGAGTTTATGCCTAATGGTACTCTGAGAGACCACCTATC
TGGTAAATAATTATATAATTCACATTGCTCTTGCCTCCATTTATTTGTGC
AAATCTTTTCCTTCTAGCACTTTATTTTGATAAGGAAAATATTTAAGTAT
GCAAACGATTAACTAATCCACAACATCTAGCTTTGTCCCCAACGAAATCC
CTTCCGATGAAAATTGTCGAATATCAGTCTTTCTGCTGGTTAATGTTAGG
GGATTGGTTTTGGGGGAAAGCACTAGCAGAAATCAAGTCTTTGACCATAT
TATATGGGATTTAATGGGTTGACTTGTGGTGTGACAGGTAAATGTAAAGA
ACCTCTAAGTTTTGCTATGCGATTGAAAGTTGCCTTAGGTTCCGCTAAGG
GCATTCTATACTTGCACACGGAGGCTGATCCTCCCATATTCCATCGAGAT
ATCAAGGCAAGCAATATATTGCTAGACTCTAAGTTTATTGC
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG640  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D406 marker 406
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