SGN Marker CT217
SGN-M522
Synonyms |
Locus associations |
RFLP details |
Insert size
500
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT217 image not available
|
Forward sequence
GATCCGGCACAGGATGAATTGGATCTGAAAGAAGCGTTTGATGTTTTTGACTATAACGGGGATGGATTTATATCGGCGAAGGAATTGCAG
GTGGTGTTAGAGAAATTGGGATTACCGGAAGGAAGTGAAATTGATAGACCGGAGATGATGATTTCTTCATTTCATCAGGATCATGATGGT CGCGTTGATTTCTTCAAGTTCAAAGATATGATGCGTACTGTTATTGTTCCTTCATGATTTTTACTTTCCAGATTCTCGGCGCCGGAATGT GACATCACTTTACGGCCGGTTATTTTTACTTGCTTCTTTTTCTG |
Reverse sequence
TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGCTGATTTAACTTTAGGGTAATATTGATGATGCATAATTTTTCACATTATACGATAAGT
ATGTTTGATACAAAGATGGCACAAAACAGCTGAACCAAATACAGAAAAAGAAGCAAGTAAAAATAACCCGCCGTAAAGTGATGTCACATT CCGGCGCCGAGAATCTCGAAAGTAAAAATCCTGAAGGAACAATAACAGTACGCATCATATCTTTGAACTCGAAGAAATCAACGCGACCAT CATGATCCTGATCAACTGACGAAATCATCATCTCCACTCTATCAATTTCACTTCCTTCCGGTAATCCCAATTTCTCTAACACCACCTGCA ATTCCTTCGCCGATATAAATCCATCCCCGTTCTCGTCAAAAACATCAAACGCTTCTTTCAGATCCAATTCATCCTGTGCCGGAT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U147634 | 1e-154 | 314 (100.0% of RFLP seq) | + |
SGN-U147634 | 411 (92.6% of RFLP seq) | - |
Mapped locations |
| Eggplant-COSII |
| Tomato-EXPEN 2000 |
| Eggplant-LXM 2002 |
| Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT217 was used as an overgo probe on plate 14 [well H2]
Plausible BAC Matches: P263B10, P250H11, P158N21, P204I05, P204A16, P189B10
Overgo Sequences
A sequence
TGCAGGTGGTGTTAGAGAAATTGG
|
B sequence
CTTCCTTCCGGTAATCCCAATTTC
|
AB sequence
TGCAGGTGGTGTTAGAGAAATTGGGATTAC
|
Marker sequence
GATCCGGCACAGGATGAATTGGATCTGAAAGAAGCGTTTGATGTTTTTGA
CTATAACGGGGATGGATTTATATCGGCGAAGGAATTGCAGGTGGTGTTAG AGAAATTGGGATTACCGGAAGGAAGTGAAATTGATAGACCGGAGATGATG ATTTCTTCATTTCATCAGGATCATGATGGTCGCGTTGATTTCTTCAAGTT CAAAGATATGATGCGTACTGTTATTGTTCCTTCATGATTTTTACTTTCCA GATTCTCGGCGCCGGAATGTGACATCACTTTACGGCCGGTTATTTTTACT TGCTTCTTTTTCTG |
Related Markers |
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of CT217 |
User comments |
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