SGN Marker CT224
SGN-M547
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
1500
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
|
Forward sequence
TCCTTTAACTGCTTCCTGAAGGATTGCTTTTGTTGTAAAATCGAATGCAGTTGAAAGTTGTCCCGCGCCATCAATCCAATTGATGATTCT
TTGCCTGTGACTATCTTGGTTGTAATCCAAATTGCTGCCCTTGTAATTGCAAGTGTCCCAGTATTCTCCAACTGCAAATATTGGCTTAGC TCCCTCGATATATTCCTTTACATACTTCGAAGCATAACCTTTGGCAAAATCAAAACGAAAATCTTGGAAGCCAACAGAGGATCTTAGCCA CCGCATCCAGTCAATGAGATCTTTCCGGACAAAGGATTGTGTATGATCTATATTTGGAAATCCGTTAAAGTTGTCTCCAGTGCTTTTGTT ACCCCTTCCACCAGTGCAAGATGTAATAGCATGTTCATCCCAAGACATAGGAATTCCTTTTTTTTTTTTTTTAAACTAAAAGTTGGTTTC AAAGTAGATAAAAATAAAGTATTCTCAACAAGACGGGAGCAAACATAAGCAACTG |
|
Reverse sequence
TTTTTTTTTTTTTTTTTTTGGCGCCTACGGTAGGCAATCTGAACCTCCTCAGCCAAATTGGCCAAGTTAAGCATGTGAGAGAAAGCTTTA
GCAATAACAATTGAATCCCCTGGATCCAAACTTGTCAACACATTGCCAAGTTCCTCCAGCTTCTTCGGATCATGCTTGGCTTCATACTCG GCAGAAAGCTCATAACAATCTTGGACTGTTCCTTTGAGATCCTCTCCATGCAAATCTTGAAGAATATCAAGAAACCTATCCAAAAGCAAA GCATCATACTCAACAAGTTTATCATCTTCAGAAACTTTAGCAGGCACCAGTTGCCTCAACTGTGCATCAATTGAAGCAAGTTTCTCCAAA TTCTTAGCAGCCATTTCTCCATCTCTCTCAGCAGAGTCCAGCCAGCCATGGGTATCGATCTGAAGGCCGGAGGTAAGAGTAAGAAGACTA AGCGTACCGCCCCTAAGTCTGACGATGTTTACCTCAAGCTCCTCGTCAAGCTTTACCGATTCTTG |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U168994 | 1.6e-13 | 38 (7.5% of RFLP seq) | + |
| SGN-U160967 | 1.8e-22 | 73 (14.5% of RFLP seq) | + |
| SGN-U144144 | 2e-34 | 73 (14.5% of RFLP seq) | + |
| SGN-U166531 | 1e-162 | 288 (57.0% of RFLP seq) | + |
| SGN-U144780 | 3.8e-08 | 105 (20.4% of RFLP seq) | - |
| SGN-U161250 | 3.8e-08 | 105 (20.4% of RFLP seq) | - |
| SGN-U161249 | 3.8e-08 | 105 (20.4% of RFLP seq) | - |
| SGN-U159296 | 7.1e-22 | 320 (62.1% of RFLP seq) | - |
| SGN-U144144 | 9.3e-80 | 149 (28.9% of RFLP seq) | - |
| SGN-U159575 | 9.3e-80 | 313 (60.8% of RFLP seq) | - |
| SGN-U159664 | 1.6e-87 | 330 (64.1% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Potato meta-QTL consensus map |
|  Potato meta-QTL consensus map |
|  Tomato-EXPEN 1992 |
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of CT224
|
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