SGN Marker SSR47
SGN-M720
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 42.857 High: 40.909
Repeat motif: AT Repeat number: 14
Repeat motif: Repeat number:
Forward primer: TCCTCAAGAAATGAAGCTCTGA
Reverse primer: CCTTGGAGATAACAACCACAA
Predicted size: 191
| Derivations |
This marker was derived from EST read SGN-E92362
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Other PCR data |
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| Overgo hybridization and physical mapping |
SSR47 was used as an overgo probe on plate 1 [well C4]
Plausible BAC Matches: P318G15, P214J08, P150M10, P263A24, P067A09, P062M18, P303N06, P327C18, P302C18, P219C13, P286B18, P139L03
Overgo Sequences
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A sequence
ACCGGGCCATTTTACTCTAGCACT
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B sequence
GACCCGGTTCAATACTAGTGCTAG
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AB sequence
ACCGGGCCATTTTACTCTAGCACTAGTATT
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Marker sequence
ATATAAATAAATACATTCAAAATTTATTCATGATAAAGATCAAACTTATA
TTGGCACTACATTCATTGACATTAACAATTCCTCAAGAAATGAAGCTCTG ACATCAAATTTCTCACAAAAAGAAATATTATAATATATATATATATATAT ATATATATATTCTCAATAGGAAAACAAGCTAAAACAACATATGCTAAGAA AAATCTTAACACATGAACATATGCAAGCAATGAACCAGACTAGTAACTAT TGTGGTTGTTATCTCCAAGGTATATATATTAATAAATACCCCATAAGTTG TTGATATTTTTGATAAAAATTATATTAATAAATACCCTATAAGATAAACC CTCAGCGGTCGCTGATTTAAAATAATGTATTCAAGAGGAAGTCAAACCAG AATAAAATGGCACCCCGGTAGCAGGTATCCACTCACTCCCTTGAATAAAA TTTCCAACAGTGAATTGACTGGCCTCACTAGAGCTATTAATGACCCGATA ACCGGGCCATTTTACTCTAGCACTAGTATTGAACCGGGTCCC |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of SSR47
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| User comments |
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