SGN Marker SSR49
SGN-M722
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 50 High: 40.909
Repeat motif: TC Repeat number: 6
Repeat motif: AC Repeat number: 4
Repeat motif: Repeat number:
Forward primer: TCTCAAAGTCGTTCCTTCTTGA
Reverse primer: GGAAGAGAAACGCGGACATA
Predicted size: 161
| Derivations |
This marker was derived from EST read SGN-E176165
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Other PCR data |
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| Overgo hybridization and physical mapping |
SSR49 was used as an overgo probe on plate 11 [well H5]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
TCCATTCCACCTTTGCTTCACGCT
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B sequence
AGAGAAACGCGGACATAGCGTGAA
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AB sequence
TCCATTCCACCTTTGCTTCACGCTATGTCC
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Marker sequence
GAATTAATTCTCTCAAAGTCGTTCCTTCTTGAGAAAAAAGAACACACACT
CTCTCTCTCTCCTCCATCCACCACCATTCACCACCACCATGGTCATATCC AAGGCCGCCTCGGAGTCGGATCTCTCCGTCCATTCCACCTTTGCTTCACG CTATGTCCGCGTTTCTCTTCCCCGGTTTAAGATGCCGGAGAATTCGATAC CAAAGGATGCAGCATATCAAATAATAAATGATGAATTAATGTTGGATGGA AATCCAAGGCTTAATTTAGCTTCATTTGTGACAACATGGATGGAACCAGA ATGTGATAAGCTAATCATGGATTCAATTAACAAGAATTATGTTGACATGG ATGAATACCCTGTCACCACTGAGCTTCAGAATCGATGTGTAAACATGATA GCCCATTTATTTAATGCACCATTGGGAGAGGGAGAGGCTGCTGTTGGAGT TGGAACAGTTGGATCCTCAGAAGCCATTATGCTTGCTGGATTAGCCTTTA AGAGAAAATGGCAAAACAAAATGAAGGCCCAAGGAAAGCCTCATGACAAG CCCAATATTGTTACTGGGGCCAATGTCCAGGTATGCTGGGAAAAATTTGC GAGGTACTTCGAAGTAGAATTAAAAGAAGTGAAATT |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of SSR49
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| User comments |
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