Sol Genomics Network

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Unigene SGN-U208279

Unigene Basic Information

Unigene ID:	SGN-U208279
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	208279
mRNA sequence:	Length: 526 bp

>SGN-U208279 Petunia hybrida #1 (3 members)
AAGAGGGAAGGTAGAACTGAAGAGAATTGAGAACAAAATAAATAGACAAGTGACTTTTGCAAAGAGAAGAAATGGACTTCTCAAGAAGGC
TTATGAACTTTCTGTTCTTTGTGATGCTGAGGTTGCTCTTATTATCTTTTCAAACCGTGGCAAACTCTATGAATTTTGCAGCAGCTCAAG
TATGTCCACTACATTGGAGAAATACCATAGATACTGTTATGGTGCACTTGAAGGAAGCCAACCTTCAACAGATTCACAGAACATCTACCA
GGAGTATCTGAAGCTTAAAACAAGAGTGGAAGCTTTACAACAGTCTCAAAGGCATATGCTAGGAGCGGATTTAGGACAATTAGGCACAAA
AGACCTTGAACAGCTCGAACGTCAACTGGACTCATCATTGAGACAAATAAGGTCAACAAGGACACAAAACATGCTTGATCAACTGTCCGA
ACTTCAAGAAAAGGAACAATCTCTTATTGAAATGAACAAATCTTTGAGGATGAAGACATCAATGCATTCAGGAGAG

[Blast] [AA Translation]

Associated Loci (22)

Locus symbol	Locus name	Gene activity
PMADS9	floral binding protein 9 AY370510	transcription factor
FBP11	floral binding protein 11	transcription factor
TM6	paleoAP3-type MADS-box protein	MADS-box transcription factor
pMADS1	type 1 MADS box transcription factor	DNA-binding protein
PMADS10	floral binding protein 10	transcription factor
PFG	floral binding protein PFG	transcription factor
PMADS12	floral binding protein 12
FBP28	MADS-box protein 28	transcription factor
PMADS15	floral binding protein 15	transcription factor
PMADS14	floral binding protein 14	transcription factor
fbp7	floral binding protein 7	transcription factor
PMADS2	floral binding protein 2
FBP6	floral binding protein 6 AY370525	transcription factor
PhSEP1	SEPALLATA1-like
FBP9	MADS-box transcription factor	transcription factor
FBP23	MADS-box transcription factor 23	transcription factor
FBP22	MADS-box transcription factor 22	transcription factor
FBP21	MADS-box transcription factor 21	transcription factor
FBP13	MADS-box transcription factor 13	transcription factor
FBP4	MADS-box transcription factor 4	transcription factor
AGL6	Agamous-like 6	transcription factor
PETTRNSFB	floral binding protein 2 PETTRNSFB

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-DevA	all floral organs several	2870	3

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	41	TF_MADSbox	256
2	22000	TF_MADSbox	192
5	56273	TF_MADSbox	182
1.1	101412	Transcription factor MADS-box - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	242
2	118437	Transcription factor MADS-box - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	170
5	128950	Transcription factor MADS-box - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	149

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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