Solanum lycopersicum mRNA Solyc01g009070.2.1
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Name | Type |
Length
1,775
|
Organism |
Description
MYB transcription factor (AHRD V1 **-* Q9FR97_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
|
Location(s)
SL2.50ch01:3075589..3080069
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 4481
- Sifter term
- GO:0003700
![]() | spliced mRNA sequence, including UTRs |
>Solyc01g009070.2.1 MYB transcription factor (AHRD V1 **-* Q9FR97_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
ATGAGCATCAAAAGTGAAACCGAGGAAAGGATGACATCCAAAGTTGACATGGATTCACCAGATGAAGCTAGCGGTGGAGA
TTTAGGAGAAAGTGTACCACTTAAAAAAGGTCCCTGGACTTCTGCGGAAGATGTAATTTTAGTGGATTATGTAATGACAC
ATGGTGAGGGGAACTGGAATGCTGTACAGAGGCATTCAGGACTTGCTCGTTGTGGTAAAAGTTGCCGCTTGCGGTGGGCA
AATCACCTGAGACCAGATTTAAAGAAAGGTGCATTCACACCAGAGGAAGAGCAGCGGATAGTTGAACTGCATGCTAAAAT
GGGAAATAAATGGGCACGCATGGCTGTTGAGTTGCCTGGCCGTACAGATAATGAGATAAAGAACTACTGGAACACTAGAA
TAAAGAGACGACAACGTGCAGGCTTGCCAATTTACCCTGCAGATATTTCTTTCATGGCAAGTCAGAACAAACAAAATGAG
GAATTGGGTGCATTCTCCTCCGCAGATGCACAAAATCCTGATGTCTTGGGAATTAACAATTTTGAGATTCCTGCTGTGGA
GTTCAAAAAATTGGAACTCACTCATCTGTTGTATCCGCCACAACTTGCAGACATTCCTGCTCGTAGCTTGCTTAATGATC
CTGTAAGTAACTTTCTGTCCCAGGGTCATAGAGCTCCCTATAGTAGTACATATTTCCTTTCTACAACTTATCCTGCAAAG
CGTATACGAGGATCAGAATCTGTGTTCTCCGGTTCAAATGGTGATCTCCTCAACTCCTTGCAATATCAGAATGACGGTTC
TTTGCTTGCTCAAGCTCAAGCTCAACCCTTGGATTTTTCTTCATATAATCATAATTTAACATATGATGATCAGCGAGCAA
TCTCAAATATAGTTCCGGGCGGCCATGCCTATTTAAATGGCAACTCCTCTTCAGAGCCCACATGGGCAATGAAGCTGGAG
CTCCCTTCACTCCAAAACCAGACAGAGAACTGGGGTTCACCTCATTCGGCTCTTCCTTCATTAGACTCTGTTGATATTCT
AATTCAATCCCCTCCAGCTGGACATAGTGAATCCGGTAGTCTGTCACCTAGCAACAGTGGTCTACTGGATGCTGTGCTTC
ATGAATCTCAAACTATGAAAGCTTCAAATGATAACTCATACCAAGGGAACGAGACATCTGGTAATGCAGTCAATAATTCA
TGTCCAGATCTCAAAGGATGTGATATTTATGGGCATCCAGTCTCTCCTTTAAGTCAATTCTCTGCATCAGTATTCAGTGA
CTACGCCCCTATCAATGAAAGTTCATTACACGAGTTCCCGTCAATGGCCACAATGCCAGGAGGCGAGATTAAGCAAGAGA
TTGGCGATCTATCCCCCTTGGACGATGAAGACAACACATCAAACCAGACGATCTTTTCCAGTCCCAAGACACAGCATGCT
AATAACCATCTGGCTTCGAAAGATCCTTTTGGTTCTTGCTTTTTCGATGATTGCGACTGGGATTGCAAGCAAATCCATGC
AGTAACCACATCATCAGGTCAAGCTAATGGACACAATTCTTGTTCTTGGGATGCCATATCAGCCATGGAAGCAACAGGAA
GAATGAGATTATGACAGTTTTGAAGTTTTGGTAACATCTTTCGATACAACAGGTTGTTATCTAATGACACTGAGCATGTA
ATATGAAAACACTTCTGGATTTTCCTGTGTGCTTCGGTTTAAGGCAATTTAGAGACAAACAATGAAACTTTTTTTAATGT
GGGATCAAATTGGAC
ATGAGCATCAAAAGTGAAACCGAGGAAAGGATGACATCCAAAGTTGACATGGATTCACCAGATGAAGCTAGCGGTGGAGA
TTTAGGAGAAAGTGTACCACTTAAAAAAGGTCCCTGGACTTCTGCGGAAGATGTAATTTTAGTGGATTATGTAATGACAC
ATGGTGAGGGGAACTGGAATGCTGTACAGAGGCATTCAGGACTTGCTCGTTGTGGTAAAAGTTGCCGCTTGCGGTGGGCA
AATCACCTGAGACCAGATTTAAAGAAAGGTGCATTCACACCAGAGGAAGAGCAGCGGATAGTTGAACTGCATGCTAAAAT
GGGAAATAAATGGGCACGCATGGCTGTTGAGTTGCCTGGCCGTACAGATAATGAGATAAAGAACTACTGGAACACTAGAA
TAAAGAGACGACAACGTGCAGGCTTGCCAATTTACCCTGCAGATATTTCTTTCATGGCAAGTCAGAACAAACAAAATGAG
GAATTGGGTGCATTCTCCTCCGCAGATGCACAAAATCCTGATGTCTTGGGAATTAACAATTTTGAGATTCCTGCTGTGGA
GTTCAAAAAATTGGAACTCACTCATCTGTTGTATCCGCCACAACTTGCAGACATTCCTGCTCGTAGCTTGCTTAATGATC
CTGTAAGTAACTTTCTGTCCCAGGGTCATAGAGCTCCCTATAGTAGTACATATTTCCTTTCTACAACTTATCCTGCAAAG
CGTATACGAGGATCAGAATCTGTGTTCTCCGGTTCAAATGGTGATCTCCTCAACTCCTTGCAATATCAGAATGACGGTTC
TTTGCTTGCTCAAGCTCAAGCTCAACCCTTGGATTTTTCTTCATATAATCATAATTTAACATATGATGATCAGCGAGCAA
TCTCAAATATAGTTCCGGGCGGCCATGCCTATTTAAATGGCAACTCCTCTTCAGAGCCCACATGGGCAATGAAGCTGGAG
CTCCCTTCACTCCAAAACCAGACAGAGAACTGGGGTTCACCTCATTCGGCTCTTCCTTCATTAGACTCTGTTGATATTCT
AATTCAATCCCCTCCAGCTGGACATAGTGAATCCGGTAGTCTGTCACCTAGCAACAGTGGTCTACTGGATGCTGTGCTTC
ATGAATCTCAAACTATGAAAGCTTCAAATGATAACTCATACCAAGGGAACGAGACATCTGGTAATGCAGTCAATAATTCA
TGTCCAGATCTCAAAGGATGTGATATTTATGGGCATCCAGTCTCTCCTTTAAGTCAATTCTCTGCATCAGTATTCAGTGA
CTACGCCCCTATCAATGAAAGTTCATTACACGAGTTCCCGTCAATGGCCACAATGCCAGGAGGCGAGATTAAGCAAGAGA
TTGGCGATCTATCCCCCTTGGACGATGAAGACAACACATCAAACCAGACGATCTTTTCCAGTCCCAAGACACAGCATGCT
AATAACCATCTGGCTTCGAAAGATCCTTTTGGTTCTTGCTTTTTCGATGATTGCGACTGGGATTGCAAGCAAATCCATGC
AGTAACCACATCATCAGGTCAAGCTAATGGACACAATTCTTGTTCTTGGGATGCCATATCAGCCATGGAAGCAACAGGAA
GAATGAGATTATGACAGTTTTGAAGTTTTGGTAACATCTTTCGATACAACAGGTTGTTATCTAATGACACTGAGCATGTA
ATATGAAAACACTTCTGGATTTTCCTGTGTGCTTCGGTTTAAGGCAATTTAGAGACAAACAATGAAACTTTTTTTAATGT
GGGATCAAATTGGAC
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc01g009070.2.1 | SL2.50ch01:3075749..3080069 | 538 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc01g009070.2 | SL2.50ch01:3075589..3080069 | 4,481 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc01g009070.2.1.1 | SL2.50ch01:3079719..3080069 | 351 | - | n/a |
exon | exon:Solyc01g009070.2.1.2 | SL2.50ch01:3076117..3077104 | 988 | - | 2 |
exon | exon:Solyc01g009070.2.1.3 | SL2.50ch01:3075589..3076024 | 436 | - | n/a |
intron | intron:Solyc01g009070.2.1.2 | SL2.50ch01:3077105..3079718 | n/a | - | n/a |
intron | intron:Solyc01g009070.2.1.3 | SL2.50ch01:3076025..3076116 | n/a | - | n/a |
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