Sol Genomics Network

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Solanum lycopersicum gene Solyc01g091170.2

Name Solyc01g091170.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc01g091170	Length 2,219

Description

Agmatinase (AHRD V1 ***- Q1IPT1_ACIBL); contains Interpro domain(s) IPR016160 Aldehyde dehydrogenase, conserved site IPR006035 Ureohydrolase

Location(s)

SL2.50ch01:84863098..84865316

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2219

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc01g091170.2.1	SL2.50ch01:84863098..84865316	1,405	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc01g091170.2 SL2.50ch01:84863098..84865316
CGCTGTAATCAATTCCATTACTACTGAAAAGGAAGTTCTTAGCTCTATTTAACTTCAATTGCCTTTTTTTTTTTCTCTCA
ATCACACTTAACACTGCTTCATTTCTTGTGTAGTCACTTCCTCCTTTATTCTTTGTTTACTTTAATTTCCAGCTCTTTCG
GTTTCTGCATTTTTTTTTATATATTTTTCCTTTTTGTTGTGTTGAATCAGAGTAAACAAATATGAAGAGTGCTGGAAGTA
TGGGAATCAACTATATGCAGAAATTGCTAACGTCAAATGTTCCAAAAGAAGTAGTCAAAAGAGGACAGGATCGTGTTGTA
GAGGCATCTCTTACACTTATTCGTGAAAGAGCAAAACTTAAGGTATGTTATTTTGAGTGGGACAGAGGCGGATCTAGAAT
TTTATGGGTTTCATATTCGTAATTTTACCACCACCATCATGGAAAATGGACTTTTAAAATTGAAAATGTAGGATTTAAAT
TTTAAGTTACTTTGATAGGGAGAGCTTGTTCGTGGACTTGGAGGTGCAGTAGCGTCAACGTCACTTCTTGGAATTCCTCT
GGGACACAACTCTTCATTTCTCCAGGGCCCTGCATTTGCTCCTCCTCTTATACGAGAGGCTATTTGGTGTGGCAGTACAA
ACTCCACAACTGAGGAAGGTTAGTCTACCTTTTTAAAATTACTTTGGACAAAATGAACATGTAAAAGATATGAGATATCT
TAACACGCCCAGACCATAACTGGATTATAAATGTTGGCTATCATCAGTGAACAACAAATTGGGATGGGTCTGATACCACG
TAAAGATGGATCTACTGTGTGTAGAAAAGAATAAATTAATAAATGCAGTCTAATTCGCTAGACCTCTTGAATGTTAAAAT
ACATAATGGAGTCATGTATTCCTTTATTTGTATTGTGCAGGAAAAATATTAGATGATCAACGTGTCTTAACTGATGTTGG
TGATCTGCCAGTACAAGAGTTACGAGACACAGGCATAGATGACGATAGGTTGATGAGTACAGTAAGTGAATCTGTCAAGC
TAGTTATGGACGAGGTAAGCCATCACCTATCGGAGAGTATTTTAATACAGTAGACCTTTGTTAGGATGCACCCATTAAAT
TACTAAAATCATTATAAAGGACTCACCCTGTATGCTTCAATTTTCTAACATTTTCAGAATCCATTGCGCCCCTTGGTGTT
AGGGGGTGATCACTCTATATCCTATCCTGTTGTAAGAGCTGTGTCTGAAAAGCTTGGAGGACCTGTTGATATCCTTCACC
TTGATGCTCATCCTGACATTTATGATGCATTTGAAGGAAACAAATACTCACATGCATCAAGCTTTGCACGAATAATGGAG
GGTGGTTATGCTCGACGCCTTTTGCAAGTAATATAACTTATTTCTTGGTTTTAACAATGAATACAAATTGTTTACCAAAA
CAGTACTTCATCTTCTGTTTGTAGGTTGGAATTAGATCAATTAATCTAGAAGGTCGAGAACAAGGAAAAAGGTTTGGTGT
GGAGCAATATGAAATGCGAACATTTTCCAGAGACAGACAATTTTTGGAGAATCTGGTCTGTATTTCTTTACCAGATTCGA
GATGCATACTACTCTCATATAGCAACTGCTAGTTTCCATTCATGATTTATTTGCTTGCTCGATTGTCTAATACTTTTCAT
TTAAAATCAGAAACTTGGTGAAGGTGTAAAGGGCGTGTATATATCCGTGGATGTTGACTGTTTGGATCCAGCATTTGCTC
CTGGAGTATCTCATTTTGAGTCAGGCGGTCTCTCGTTCCGCGATGTTCTAAACATACTGCATAACCTTCAAGGTGATATC
GTTGGTGCTGATGTCGTTGAGTACAACCCACAGCGTGATACTGCTGATGGCATGACTGCAATGGTTGCTGCGAAGCTGGT
AAGAGAACTTGCTGCCAAGATGTCCAAGTGACCTGCAGTAATTTTCAATTTTAACAAGCAAGAAGTACCATGTATCCTAT
TAGTGTACTCATCTTTATGCGAAAATAAGTGTTTATTCACATTAGGTAGGTCTGGCAGATGCTCAGTTTCCTATGGCAAG
GGGGATTGGGATTATCTGTAAACTTGCCTCCCAAAATAAGCTAGTATATTTGCAGTTCCTTATGAGTAACCTGTTGTTGT
AAGTGACACTTGTATCATTTGGTATGGAGTTTGTTGTGTATGGATGTTTTGAATCTTTT

Download sequence region

Download sequence (2.2Kb)

Get flanking sequences on SL2.50ch01

mRNA Solyc01g091170.2.1

Ontology terms

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc01g091170.2.1	SL2.50ch01:84863318..84865048	339	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc01g091170.2	SL2.50ch01:84863098..84865316	2,219	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc01g091170.2.1.1	SL2.50ch01:84863098..84863206	109	+	n/a
exon	exon:Solyc01g091170.2.1.2	SL2.50ch01:84863308..84863459	152	+	n/a
exon	exon:Solyc01g091170.2.1.3	SL2.50ch01:84863596..84863755	160	+	n/a
exon	exon:Solyc01g091170.2.1.4	SL2.50ch01:84864018..84864151	134	+	n/a
exon	exon:Solyc01g091170.2.1.5	SL2.50ch01:84864275..84864484	210	+	2
exon	exon:Solyc01g091170.2.1.6	SL2.50ch01:84864562..84864672	111	+	n/a
exon	exon:Solyc01g091170.2.1.7	SL2.50ch01:84864788..84865316	529	+	n/a
intron	intron:Solyc01g091170.2.1.1	SL2.50ch01:84863207..84863307	n/a	+	n/a
intron	intron:Solyc01g091170.2.1.2	SL2.50ch01:84863460..84863595	n/a	+	n/a
intron	intron:Solyc01g091170.2.1.3	SL2.50ch01:84863756..84864017	n/a	+	n/a
intron	intron:Solyc01g091170.2.1.4	SL2.50ch01:84864152..84864274	n/a	+	n/a
intron	intron:Solyc01g091170.2.1.5	SL2.50ch01:84864485..84864561	n/a	+	n/a
intron	intron:Solyc01g091170.2.1.6	SL2.50ch01:84864673..84864787	n/a	+	n/a

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Related views

Genetic loci

Tomato locus ARG2 (ARGINASE 2)

http%3A%2F%2Fsolgenomics.sgn.cornell.edu%3A8080%2Ffeature%2F17690022%2Fdetails feature 17690022

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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