Solanum lycopersicum mRNA Solyc03g031860.2.1

mRNA details  
Name
Solyc03g031860.2.1
Type
mRNA
Length
1,931
Organism
Solanum lycopersicum
Description
Phytoene synthase 1
Location(s)
SL2.50ch03:4326134..4330127
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016765
  • GO:0009058
Length
3994
Nb exon
6
Sifter term
  • GO:0046905
  • GO:0016767
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g031860.2.1 Phytoene synthase 1

GATTTCACTATATTGTAATATTAACTTGAGGTCACTATAGGAGCTCAAAAACTTCTAATTTTGAATCAATGTCTGGTTAT
ACTTTTTTTGTCATAACTGTATCTCAAATGTGGTGTTTGGTTTATCTCATTTTGCAGAAGTCAAGAAACAGGTTACTCCT
GTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTT
GTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTAAGTAAAGTTTGGAAGGT
GACAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTTAT
GGGTTGTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCA
TCGAGGCATAGGAATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGAAATTTTC
TGTACGGTCTGCTATTTTGGCTACTCCATCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGTTTTGA
GGCAGGCAGCCTTGGTGAAGAGGCAACTGAGATCTACCAATGAGTTAGAAGTGAAGCCGGATATACCTATTCCGGGGAAT
TTGGGCTTGTTGAGTGAAGCATATGATAGGTGTGGTGAAGTATGTGCAGAGTATGCAAAGACGTTTAACTTAGGAACTAT
GCTAATGACTCCCGAGAGAAGAAGGGCTATCTGGGCAATATATGTATGGTGCAGAAGAACAGATGAACTTGTTGATGGCC
CAAACGCATCATATATTACCCCGGCAGCCTTAGATAGGTGGGAAAATAGGCTAGAAGATGTTTTCAATGGGCGGCCATTT
GACATGCTCGATGGTGCTTTGTCCGATACAGTTTCTAACTTTCCAGTTGATATTCAGCCATTCAGAGATATGATTGAAGG
AATGCGTATGGACTTGAGAAAATCGAGATACAAAAACTTCGACGAACTATACCTTTATTGTTATTATGTTGCTGGTACGG
TTGGGTTGATGAGTGTTCCAATTATGGGTATCGCCCCTGAATCAAAGGCAACAACAGAGAGCGTATATAATGCTGCTTTG
GCTCTGGGGATCGCAAATCAATTAACTAACATACTCAGAGATGTTGGAGAAGATGCCAGAAGAGGAAGAGTCTACTTGCC
TCAAGATGAATTAGCACAGGCAGGTCTATCCGATGAAGATATATTTGCTGGAAGGGTGACCGATAAATGGAGAATCTTTA
TGAAGAAACAAATACATAGGGCAAGAAAGTTCTTTGATGAGGCAGAGAAAGGCGTGACAGAATTGAGCTCAGCTAGTAGA
TTCCCTGTATGGGCATCTTTGGTCTTGTACCGCAAAATACTAGATGAGATTGAAGCCAATGACTACAACAACTTCACAAA
GAGAGCATATGTGAGCAAATCAAAGAAGTTGATTGCATTACCTATTGCATATGCAAAATCTCTTGTGCCTCCTACAAAAA
CTGCCTCTCTTCAAAGATAAAGCATGAAATGAAGATATATATATATATATATATAGCAATATACATTAGAAGAAAAAAAG
GAAGAAGAAATGTTGTTGTATTGATATAAATGTATATCATAAATATTAGGTTGTAGTAACATTCAATATAATTATCTCTT
GTAGTTGTTGTATCTTCACTTTATCTCAACTCCTTTGAGAGAACTTTCCGTAGTTATCTGCTTTGCACTTGGTTACTCAG
AATTTTACTGTGGGCATGATAATTGATATACCAAATTCAGTTTTGATTCTATCGAAAAATTTGTTATTACATTTTTTTGG
GGGGAAAGGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g031860.2.1SL2.50ch03:4326514..4329816413+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g031860.2SL2.50ch03:4326134..43301273,994+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g031860.2.1.1SL2.50ch03:4326134..4326926793+n/a
exonexon:Solyc03g031860.2.1.2SL2.50ch03:4327047..432709751+n/a
exonexon:Solyc03g031860.2.1.3SL2.50ch03:4327521..4327693173+2
exonexon:Solyc03g031860.2.1.4SL2.50ch03:4328007..4328242236+2
exonexon:Solyc03g031860.2.1.5SL2.50ch03:4328761..4328953193+n/a
exonexon:Solyc03g031860.2.1.6SL2.50ch03:4329643..4330127485+1
intronintron:Solyc03g031860.2.1.1SL2.50ch03:4326927..4327046n/a+n/a
intronintron:Solyc03g031860.2.1.2SL2.50ch03:4327098..4327520n/a+n/a
intronintron:Solyc03g031860.2.1.3SL2.50ch03:4327694..4328006n/a+n/a
intronintron:Solyc03g031860.2.1.4SL2.50ch03:4328243..4328760n/a+n/a
intronintron:Solyc03g031860.2.1.5SL2.50ch03:4328954..4329642n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.sgn.cornell.edu%3A8080%2Ffeature%2F17754115%2Fdetails feature 17754115
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‹June 2025›
SuMoTuWeThFrSa
25262728293031
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891011121314
15161718192021
22232425262728
293012345
‹June 2025›
SuMoTuWeThFrSa
25262728293031
1234567
891011121314
15161718192021
22232425262728
293012345
‹June 2025›
SuMoTuWeThFrSa
25262728293031
1234567
891011121314
15161718192021
22232425262728
293012345
‹June 2025›
SuMoTuWeThFrSa
25262728293031
1234567
891011121314
15161718192021
22232425262728
293012345