Sol Genomics Network

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Solanum lycopersicum gene Solyc03g121060.2

Name Solyc03g121060.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc03g121060	Length 2,509

Description

Auxin response factor 9 (AHRD V1 *-** ARFI_ARATH); contains Interpro domain(s) IPR003311 AUX/IAA protein

Location(s)

SL2.50ch03:69297643..69300151

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2509

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc03g121060.2.1	SL2.50ch03:69297643..69300151	1,241	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc03g121060.2 SL2.50ch03:69297643..69300151
TATATACATAGACATAACTCTCCATCTTTTTATTTTTTTCTAGCTTCCTTCTACTCCATTATTTAACTCTCATATATCTT
TATAGTATTATTGCCCTTGAAACTCATCAAATTGTTAGTTGACTTTGTCACAAAGTAATTTTCAAGGCAATCTGGATTCA
AGGTATAACAAGTTTATCATAAACAAAAAATGGAAGGTTATTCACAAAAATGGCTTATGCAAAGAGGAGAAGAAATAAAT
CATGGAAATTCTGAGGAAAAAAAGCTTGAGTTAAGGCTTGGTCCTCCAAATGGAGATTGGTCATGTGGTGAGAAGGATGA
GTCGTTTTATCCTTTTAGTTACATGTCAACAACAAAGGGTAACAACAGGGATAATCATGCCCAAAATTTTTCATCATTTC
TTCAGCTTCAATCAACGGCACAGAAGCAAAGCCAGAGGGTACAGGAATCAGTTTGCACAAAAACAGCAGATTTGCAGAGC
ACAGAAAAGAAAAAAGCATTTTCACAAACAGCTACTGTGCAGAACAGCGCTCAGAAAAGGTAACTCAGCTTTTTGCCTCT
TATTTGATTTTTTATGACAGAGGATATTCACTGCTGTGGTCCATGCAACGAATGCTTTCTTTCATCTTAGTATTTTCTAG
TGTAATGTGATTTCGCAAAGCATTATTTTCCATTACATTCTAAAGTTAACATGATATTTTGTTTTGTTGTATTAGTCAAT
CATACAGTTTTAATTCCGTCGTGCCTAGCTATTCTTGTGCTATTATTTGTTGAATCATAATATAATAGAGCCGTGTTTCT
TTTGTTTGTTAATATATCCTTTTCGTGTACACAACTTTTGATTAACCCGAAATTCTGGATATTCGTTCCTTATTTCAGCA
TAGTTTCACGGATTCAAGTTATATACAGTAATTGCGTGAAAGACTATTAAAAATTTATCACTAGTGTGTGGTTAATGAAA
TGTGTTGACGCAATAATGAGTCCTCAAACTGGCTTGGACGTCGCGAATTATTAATATGAATAAATAAATATATGGTAGTA
GCAAGTTATCATTCTAAATCTCAAGTATGAAATATCAACTTTACTTATGAACAATTACTTCATTAAACCCTGATTATAAT
CTTTATCTCATAATGATTTTAGTTAACACCTTTAACAAAACATGGGAGATTAATTTAATCTCAAAATTTGAATCGTGATA
ATCCAAGTAAACCAAAATATAAAGGTGATTTTTTATGCCCTGTCTTAGCTGTTGTTTAAATTTTTGCTTTCGGCTATAAT
TTAAAGTTGGTGGGGGATTATTATTATTATTATATACTGAACTAACTTTGAAAAAATAAAATAAAATAAATAGGACTGCA
CCAGCACCAGTTGTAGGTTGGCCTCCAATTCGTTCCTTTAGGAAGAATCTTGCAAGTAGCAGCTCTGTGAAATCTGCAAG
TGAGACACAAAATGTGGTCCCAAATAAGAGTGCCAACAAAAAACCAATGGAAATTTGTCAGAAGGGATTATTTGTAAAGA
TCAACATGGATGGTATTCCTATTGGAAGGAAAGTAGATCTCAAAGCTTATGACAGCTATCACAAACTCTCTTCTGCTGTT
GATCAACTTTTTAGAGGACTTGTTGCTGGTTAGTTACTTTATCCCTTTACCCTCGTCGTTAAGCGCTTCTCTTAACTTAA
AAATTCTAACTTTGTTTTGCGAATTAGCTCAAAATGATTCATCTGCTGGTGGGAATAATGAGAAGAAGGAAGACGAGGAG
AAAGCGATAAGTGGTTTATTGGATGGAAGTGGGGAATATACTCTTGTATATGAGGATAATGAAGGTGACAGGATGCTTGT
TGGGGATGTCCCTTGGCAGTAAGCATCTCTATCTATGGATCTGATACTACTTGTTTTTCCCTTTTAATATTCTCACATTA
TTAGCATATCTTAATGTTCTCTTTATATTTGGATCACATTTTTCTTATTCTCTTTAACTAAACTAGTACATAGGACAAAG
ATCATGTGTACGATTTAGTGTTTATTGTCAGTAAGCTAAAAAAGCCAACAACAAAAAAAATTGTTACAACACACTATTTG
AAGATTAATGGCTGTAGTAACTTTCATCGGTTCGTTTCTAATTGTTTAACGTTTGATATTTTTCAGCATGTTTGTGTCTA
CTGTGAAAAGGCTGCGTGTGTTGAAAAGCTCTGAACTCTCTACACTTACTCGTGAGTGCCAAATTGTTACTCTGTTTGAT
TTGTTTAAACTTCTGCTTGGGAACTAAAATTGGTACACTTTTGATTTGCTTGTTTCAGGTGCAACTAAGCAGCTGACCTA
ATGAGCTAACAAGATGTAGAGCCAACAGATCTTGAGAGAAGAGAGTGACTTGTTTTGTATGGAATTTGAAGTTTTTTAAT
TGTTCAAGTGTAGTTGCAAAAGCAAAAAATATGGATGTAAATTATGAATATTGCTTCTAATATTTGTGTTTTTGAAAAAG
GCAAAATAATTATTATGATTGTTTGTGCT

Download sequence region

Download sequence (2.5Kb)

Get flanking sequences on SL2.50ch03

mRNA Solyc03g121060.2.1

Ontology terms

terms associated with this mRNA

GO:0003700 – sequence-specific DNA binding transcription factor activity

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc03g121060.2.1	SL2.50ch03:69297831..69299963	288	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc03g121060.2	SL2.50ch03:69297643..69300151	2,509	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc03g121060.2.1.1	SL2.50ch03:69297643..69298181	539	+	n/a
exon	exon:Solyc03g121060.2.1.2	SL2.50ch03:69298996..69299270	275	+	n/a
exon	exon:Solyc03g121060.2.1.3	SL2.50ch03:69299350..69299500	151	+	1
exon	exon:Solyc03g121060.2.1.4	SL2.50ch03:69299789..69299853	65	+	2
exon	exon:Solyc03g121060.2.1.5	SL2.50ch03:69299941..69300151	211	+	1
intron	intron:Solyc03g121060.2.1.1	SL2.50ch03:69298182..69298995	n/a	+	n/a
intron	intron:Solyc03g121060.2.1.2	SL2.50ch03:69299271..69299349	n/a	+	n/a
intron	intron:Solyc03g121060.2.1.3	SL2.50ch03:69299501..69299788	n/a	+	n/a
intron	intron:Solyc03g121060.2.1.4	SL2.50ch03:69299854..69299940	n/a	+	n/a

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Related views

Genetic loci

Tomato locus SlIAA26 (auxin-regulated IAA26)

http%3A%2F%2Fsolgenomics.sgn.cornell.edu%3A8080%2Ffeature%2F17780622%2Fdetails feature 17780622

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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