Sol Genomics Network

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Solanum lycopersicum gene Solyc06g005170.2

Name Solyc06g005170.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc06g005170	Length 3,087

Description

Mitogen-activated protein kinase 3 (AHRD V1 **** Q84MI4_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

Location(s)

SL2.50ch06:192235..195321

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3087

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc06g005170.2.1	SL2.50ch06:192235..195321	1,494	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc06g005170.2 SL2.50ch06:192235..195321
ATGGTTGATGCTAATATGGGTGCTGCTCAATTTCCTGATTTTCCTAAAATTGTCACTCATGCTGGACAATATGTTCAGTA
TGACATTTTTGGTAATCTTTTTGAGATTACTAACAAGTATCAACCTCCTATCATGCCTATTGGACGTGGCGCTTATGGAA
TCGTCTGGTAATGTTAATTTTTCGACAAAGTTATGGATTCAGATCTAATATTTATTACATATAGACACTTACAAAATTTG
TGGTCTAAAATGAGATAAATGACAAGTTTGTTGTTCATCGTTACTCCATCCATTTGTACTAGTTGAAGTGTTTTAGTTTG
ATTGAATACGGGGTTTTAAGAGATTTTGATATTGTGATCCTAAATAGAAAGTTGGAACTGGAGGGTTAAAGCAAATGGAT
TGACATATTTAGTTTGTGTATTTGCAGACTGTTGAGTGACTAATTATGGTGTCTTATTTTGTGTGAAGCTCTGTGTTTAA
TGCGGAGCTGAATGAGATGGTTGCAGTTAAGAAAATCGCCAATGCTTTTGATAATTACATGGATGCTAAGAGGACGCTCC
GTGAAATTAAGCTTCTTCGCCATTTAGACCATGAAAACGTGAGTCTTCTTGTGTAACTTTTTCACTTTGGCTATTGCTTA
ACAGGCTACTACTGTTTCACTCTTTTCCATTAGTATCAGAATATGTATGTAGTAGTTGGGATTAACTAGTTATCTGTACA
GGAAAAGTGAGGCCAGTTAGGATTAGTATTGGACTGAAATGAACCAGAGTAGCGTGAATGAATATACAAGATTCATATAG
TTTGATCCCAACTGATCTCCCTCGTTGTAGTGGAATTTCCAAAAGCCGATAATAAACTATTCCTCTGGTTTTCAGCCATG
ATTTTCCGGTTGTACCTACAGTTGGACATAAAATTTTTACAATCACTATTACACTAAGAAAAATTATTATAGTACAAGTA
ATACATTTTGCTTATCAACGAAATCAAAAATGCTATGCAGGTCATTGGTTTAAGAGATGTGATTCCTCCGCCCTTACGAA
GGGAGTTTTCTGATGTTTACATTGCTACTGAACTCATGGATACTGATCTTCACCAAATAATTAGATCAAACCAAGGTTTA
TCAGAGGATCATTGCCAGGTAAACTCACCCCCTTCTCACCCAAATGCTTTCATGGATGCCGTCTTTATTGTTTTTCTAAA
AATTTTCAAAAATGTTACTTTTGCAGTACTTCATGTATCAGCTTCTCCGTGGGCTAAAGTACATACATTCCGCGCATGTT
ATTCATAGAGATCTCAAACCAAGTAACCTCTTGCTAAATGCAAATTGTGATCTTAAGATATGTGATTTTGGTCTTGCAAG
GCCAAACGTAGAGAACGAGAATATGACAGAATATGTAGTAACCAGATGGTACAGAGCACCGGAGCTTTTGTTGAACTCTT
CAGATTACACTGCTGCCATAGATGTTTGGTCTGTGGGTTGCATCTTCATGGAGCTTATGAATAGAAAACCTTTGTTTGCT
GGAAAAGATCATGTACATCAAATTCGCTTGCTAACTGAGGTAAAAACTGATTCATGAAAGATATATTTAACAGAATAGGG
TACACTTTTTTCATGTTTTTACGTGGAACGACGCTTTGCCATGTGGATTCTTGACGTGACATCATCTATTCGAGCTGTCT
CCGTCCAAACAACCATTAACATGAGCCTTTTTTCGACTGCATATAACAACTTAGCATACCTTTCTGAGTGATTTTTGTGA
GAAACAAATGCTCATTTCTTCGTTTATTTTTCTCAGCTTCTTGGCACTCCTACAGAATCTGATCTTAGCTTCCTCCGTAA
TGAAGATGCAAAAAGATACGTCAGGCAACTCCCACAACATCCACGCCAGCAGTTAGCAACAGTGTTCCCTCATGTGAATC
CATTAGCCATTGATCTTGTAGATAAGATGTTGACGCTCGACCCTACTAGAAGAATAACAGGTAGTTTTCCTATCTGCACT
GCTATTTAAGATAGACTGGAAAGCTTGAAAGATCAACAATTTGACTAAAACAACCTCTTTGTAATAAACATAGTATACCT
CTTTTCTTGAATGAATTCACACTTTTAACGCTATGGAGTCCATCTTGCCACCATATCTTCTTACTGAAACTTTCCCTTCT
TGCATTAGTGTAATAAGGGGAGCTAAAGCGACTGCAAATCCCTTTGGGAAGAAAGACTTAACATAATATCAAGTTAATTA
ATTTGTGATTAAAAAAAGAAGGGGTTGATTAAGAACAATAGACAGTCACTCCATCATGTTTATCATCACTATCTTTGGGA
AAGCTTGTCATTCTTTCCTCAGTAAAAAGAGTTCATTTTTGCATAAGCCTGCTCTTTAGCTCATTTTAACTCAAATAACT
TTTGAACAGGTCATTGACCTGCTTATTTATCAATTTACCCCCATTTGACACCCCTGAGCTACACTGAAGGAAGATTTTTG
CTGTAATGTTTTCGATTCATTTCTCTTTTAAGCTCATCGTGTGATATATTTGTGTTTGGTTGCAGTTGAGGAAGCATTAG
CTCATCCCTACCTCGCAAAGCTCCATGATGCAGCTGATGAACCAGTCTGCCCCATCCCGTTCTCTTTCGACTTTGAGCAA
CAAGGGATAGGAGAAGAGCAGATTAAAGACATGATTTATCAAGAAGCTTTGGCGTTGAATCCTGAATATGCTTAAGCATA
AGAGAAATCAGTTCTTCTCTTGCTTACCTAGTGTGGATTTTCTTGCTTGGACCAGCCCTCTCAAAGTTTTTGTTCACAGG
GTCAGTAGTAGTCCTTTGCAACTTTAATGTAAGGCAGCCTTCAATTTGCAGCCATTTTTATATACCTTTCTTCTTTATTT
TTTTTACTTAATTATGGTGGTGTTCGGGCTAGCTTGTGTTCACTCGACTATTCCATAGGATACATGTCATCTCCCACCAA
CAAAAACGTTTGTACGTCTTCCACTCATTCATATGACTTGTATCTTGTGTTCTGTTTGTAGCTTATTATAGTAACTATTT
TTTGTTCAATGTATCATGTTGTATTATGTACAGTATGTACAAAATCT

Download sequence region

Download sequence (3.1Kb)

Get flanking sequences on SL2.50ch06

mRNA Solyc06g005170.2.1

Ontology terms

terms associated with this mRNA

GO:0016908 – MAP kinase 2 activity (obsolete GO:MAP kinase 2 activity)

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc06g005170.2.1	SL2.50ch06:192234..194949	374	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc06g005170.2	SL2.50ch06:192235..195321	3,087	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc06g005170.2.1.1	SL2.50ch06:192235..192401	167	+	n/a
exon	exon:Solyc06g005170.2.1.2	SL2.50ch06:192703..192832	130	+	1
exon	exon:Solyc06g005170.2.1.3	SL2.50ch06:193235..193372	138	+	n/a
exon	exon:Solyc06g005170.2.1.4	SL2.50ch06:193461..193793	333	+	n/a
exon	exon:Solyc06g005170.2.1.5	SL2.50ch06:194031..194214	184	+	n/a
exon	exon:Solyc06g005170.2.1.6	SL2.50ch06:194780..195321	542	+	2
intron	intron:Solyc06g005170.2.1.1	SL2.50ch06:192402..192702	n/a	+	n/a
intron	intron:Solyc06g005170.2.1.2	SL2.50ch06:192833..193234	n/a	+	n/a
intron	intron:Solyc06g005170.2.1.3	SL2.50ch06:193373..193460	n/a	+	n/a
intron	intron:Solyc06g005170.2.1.4	SL2.50ch06:193794..194030	n/a	+	n/a
intron	intron:Solyc06g005170.2.1.5	SL2.50ch06:194215..194779	n/a	+	n/a

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Related views

Genetic loci

Tomato locus mpk3 (mitogen-activated protein kinase 3)

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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