Solanum lycopersicum mRNA Solyc06g083900.2.1
 mRNA details
|
| Name | Type |
Length
837
|
Organism |
|
Description
Myb-related transcription factor (AHRD V1 **-* B2CZJ1_CAPAN); contains Interpro domain(s) IPR015495 Myb transcription factor
|
|
Location(s)
SL2.50ch06:49196135..49197260
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 1126
- Sifter term
- GO:0005515
- GO:0003700
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g083900.2.1 Myb-related transcription factor (AHRD V1 **-* B2CZJ1_CAPAN); contains Interpro domain(s) IPR015495 Myb transcription factor
TTATGCTATATCAGCTCCAAGTTCCAAGTGAAAAATCAAAACAAAGTATAGAGAGAGAAAAAATAAAATGGGGAGATCTC
CTTGCTGTGAGAAATTGGGGTTGAAAAGAGGTCCATGGAGCAAAGAAGAAGATTATTTACTCATCAATTACATTAAAAAG
AATGGTCATCCTAATTGGCGTGCACTTCCAAAACTTGCAGGTCTATTAAGGTGCGGAAAAAGTTGTAGGCTTCGATGGAC
TAATTACTTGAGACCTGATATTAAGCGAGGCAATTTTACTCATCAAGAAGAAGATACAATTATCAAGTTGCATCAAGTTC
TTGGAAACAGTTGGTCTGCTATTGCAGCAAGATTACCCGGAAGAACAGATAACGAAATAAAAAACATTTGGCATACTCGT
CTGAAGAAAAAAAGGAATGAATCTCAACTTAAAGAAACCCAATCGGAGCCTGAAAATACTAATGTAGATGTACATTTGGA
GGAGGCCAACAATTCTAATGATAAACATTCCGAAATATCGAATCTTAAAATAAACATCGAAATCCAACAACAACCAAGTC
CATCATCGTCAGTATCATCATCAAGTGAAGATTCATGTTCAAATACAACTGCAACGAGTTCAGAGTCGAGAAATCAAATA
ATGTCCGATAATTTGTTAGAAATTGATGACGATATTTGGTCCGAGGTAGTATGGGCACAAGTCGATGACAATTATGTTGA
TTTGTCATTAATGGAGGATAATTACCACATTAATTCTAGCTTTGATGATAATTGGTTTTGGGATGATCTTTTTACAAGAT
CTAATGAGTTGATGTTAGAATTGCCTGAATTATGAGC
TTATGCTATATCAGCTCCAAGTTCCAAGTGAAAAATCAAAACAAAGTATAGAGAGAGAAAAAATAAAATGGGGAGATCTC
CTTGCTGTGAGAAATTGGGGTTGAAAAGAGGTCCATGGAGCAAAGAAGAAGATTATTTACTCATCAATTACATTAAAAAG
AATGGTCATCCTAATTGGCGTGCACTTCCAAAACTTGCAGGTCTATTAAGGTGCGGAAAAAGTTGTAGGCTTCGATGGAC
TAATTACTTGAGACCTGATATTAAGCGAGGCAATTTTACTCATCAAGAAGAAGATACAATTATCAAGTTGCATCAAGTTC
TTGGAAACAGTTGGTCTGCTATTGCAGCAAGATTACCCGGAAGAACAGATAACGAAATAAAAAACATTTGGCATACTCGT
CTGAAGAAAAAAAGGAATGAATCTCAACTTAAAGAAACCCAATCGGAGCCTGAAAATACTAATGTAGATGTACATTTGGA
GGAGGCCAACAATTCTAATGATAAACATTCCGAAATATCGAATCTTAAAATAAACATCGAAATCCAACAACAACCAAGTC
CATCATCGTCAGTATCATCATCAAGTGAAGATTCATGTTCAAATACAACTGCAACGAGTTCAGAGTCGAGAAATCAAATA
ATGTCCGATAATTTGTTAGAAATTGATGACGATATTTGGTCCGAGGTAGTATGGGCACAAGTCGATGACAATTATGTTGA
TTTGTCATTAATGGAGGATAATTACCACATTAATTCTAGCTTTGATGATAATTGGTTTTGGGATGATCTTTTTACAAGAT
CTAATGAGTTGATGTTAGAATTGCCTGAATTATGAGC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g083900.2.1 | SL2.50ch06:49196136..49197193 | 256 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g083900.2 | SL2.50ch06:49196135..49197260 | 1,126 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g083900.2.1.1 | SL2.50ch06:49197061..49197260 | 200 | - | 2 |
| exon | exon:Solyc06g083900.2.1.2 | SL2.50ch06:49196802..49196931 | 130 | - | 1 |
| exon | exon:Solyc06g083900.2.1.3 | SL2.50ch06:49196135..49196641 | 507 | - | n/a |
| intron | intron:Solyc06g083900.2.1.2 | SL2.50ch06:49196932..49197060 | n/a | - | n/a |
| intron | intron:Solyc06g083900.2.1.3 | SL2.50ch06:49196642..49196801 | n/a | - | n/a |
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| Related views |
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