Solanum lycopersicum mRNA Solyc07g054840.2.1
 mRNA details
|
| Name | Type |
Length
1,025
|
Organism |
|
Description
MYB transcription factor (AHRD V1 *-*- Q6R077_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
|
|
Location(s)
SL2.50ch07:63019149..63020392
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 1244
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc07g054840.2.1 MYB transcription factor (AHRD V1 *-*- Q6R077_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
ATGGGAAGATCACCATGTTGTGATAAAAATGGACTCAAAAAAGGTCCATGGACTCCAGAAGAAGATAATAAACTCATCCA
GTATATTCAACTTCATGGTCCTGGAAATTGGCGAACACTTCCTAAGAATGCTGGACTTCAAAGGTGTGGAAAGAGTTGTC
GTCTTCGTTGGACTAATTACTTGAGACCTGATATTAAAAGAGGAAGATTCTCATTTGATGAAGAAGAAACTATTATCCAA
CTTCATAGTGTTCTTGGCAACAAGTGGTCAGCTATAGCGGCTCGTCTACCAGGGAGAACAGACAACGAAATCAAGAATTA
TTGGAACACTCACATTAGAAAAAGGCTTCTAAGAAATGGTATTGATCCAGTGACTCATAGTCCTCGTCTTGATTTATTAG
ACTTATCGTCCCTTCTAAATTCGACCCAATTCAACCTATCGAGCTTACTTGGGCTACAAGCACTTATAAACCCTGAAGTC
TTTAGTCTTGCAGCTACTCTTTTGGCATCACAAAATGAAATTACCCCAGAAGTGTTACTACAAAAATATCAAGAAAATAA
TCAAATGTTCAACTCTCAACTACAAAACCAAGAAGGGTCTGAATTGTTGTTACAAAAACTTCAACAAAATCAAATATTGA
ATTCCCAATTGCAAAATCAGACTCAATTTTTCCAATTCCAAAATCAAATTCAAGAAACACCAAATTTCACCACACAAAAT
GTTCCTTGTTCATCTTCATTGTCACGGCCAATGCAATTGGGACACGTGGAGGAATCTTATTTGATGAATGGCCAAATGCT
ACCTCCACAAAACTATGGTTATTGTAATTCTGATGCTTCTGATAATTCAAATTTCCAGTCACTCAACAACAACAGCAGCA
ATCAGAATATAAGCTTAGATTCAGTGTTATCGACACCCACGGAAGACGAAAAAGAGAGCTATTGCAGTAATTTGATGAAG
TTCGAAATCCCAGAGAGCTTAAATTTTGATGATTTTATGTAAATATCGAACCACATTGTCCAAAA
ATGGGAAGATCACCATGTTGTGATAAAAATGGACTCAAAAAAGGTCCATGGACTCCAGAAGAAGATAATAAACTCATCCA
GTATATTCAACTTCATGGTCCTGGAAATTGGCGAACACTTCCTAAGAATGCTGGACTTCAAAGGTGTGGAAAGAGTTGTC
GTCTTCGTTGGACTAATTACTTGAGACCTGATATTAAAAGAGGAAGATTCTCATTTGATGAAGAAGAAACTATTATCCAA
CTTCATAGTGTTCTTGGCAACAAGTGGTCAGCTATAGCGGCTCGTCTACCAGGGAGAACAGACAACGAAATCAAGAATTA
TTGGAACACTCACATTAGAAAAAGGCTTCTAAGAAATGGTATTGATCCAGTGACTCATAGTCCTCGTCTTGATTTATTAG
ACTTATCGTCCCTTCTAAATTCGACCCAATTCAACCTATCGAGCTTACTTGGGCTACAAGCACTTATAAACCCTGAAGTC
TTTAGTCTTGCAGCTACTCTTTTGGCATCACAAAATGAAATTACCCCAGAAGTGTTACTACAAAAATATCAAGAAAATAA
TCAAATGTTCAACTCTCAACTACAAAACCAAGAAGGGTCTGAATTGTTGTTACAAAAACTTCAACAAAATCAAATATTGA
ATTCCCAATTGCAAAATCAGACTCAATTTTTCCAATTCCAAAATCAAATTCAAGAAACACCAAATTTCACCACACAAAAT
GTTCCTTGTTCATCTTCATTGTCACGGCCAATGCAATTGGGACACGTGGAGGAATCTTATTTGATGAATGGCCAAATGCT
ACCTCCACAAAACTATGGTTATTGTAATTCTGATGCTTCTGATAATTCAAATTTCCAGTCACTCAACAACAACAGCAGCA
ATCAGAATATAAGCTTAGATTCAGTGTTATCGACACCCACGGAAGACGAAAAAGAGAGCTATTGCAGTAATTTGATGAAG
TTCGAAATCCCAGAGAGCTTAAATTTTGATGATTTTATGTAAATATCGAACCACATTGTCCAAAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc07g054840.2.1 | SL2.50ch07:63019148..63020369 | 334 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc07g054840.2 | SL2.50ch07:63019149..63020392 | 1,244 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc07g054840.2.1.1 | SL2.50ch07:63019149..63019281 | 133 | + | n/a |
| exon | exon:Solyc07g054840.2.1.2 | SL2.50ch07:63019389..63019518 | 130 | + | 2 |
| exon | exon:Solyc07g054840.2.1.3 | SL2.50ch07:63019631..63020392 | 762 | + | 1 |
| intron | intron:Solyc07g054840.2.1.1 | SL2.50ch07:63019282..63019388 | n/a | + | n/a |
| intron | intron:Solyc07g054840.2.1.2 | SL2.50ch07:63019519..63019630 | n/a | + | n/a |
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| Related views |
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