Solanum lycopersicum mRNA Solyc08g082890.2.1
 mRNA details
|
| Name | Type |
Length
920
|
Organism |
|
Description
MYB transcription factor (AHRD V1 **-- D0VYJ9_DIOKA); contains Interpro domain(s) IPR015495 Myb transcription factor
|
|
Location(s)
SL2.50ch08:65545830..65546999
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 1170
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g082890.2.1 MYB transcription factor (AHRD V1 **-- D0VYJ9_DIOKA); contains Interpro domain(s) IPR015495 Myb transcription factor
GCATCTTCTTAGTTCTCTCTGTTCTGAAAATTTTTCTTTAGAAAAAACACACACAAAAAAAAATAAAAATGGGAAGAGCA
CCATGTTGTGCTAAAGAAGGATTGCGTAAAGGGCCATGGTCTACTAAAGAAGATTTATTACTTACTAATTATATCAATCA
ATATGGTGAAGGCCAATGGAGATCTTTGCCTAAAAATGCTGGATTGCTTAGGTGTGGGAAAAGTTGTAGATTAAGATGGG
TGAATTATTTAAAGCCAGGGATTAAAAGAGGAAATTTTAGTGAAGATGAAGAAGATCTTATAGTGAGATTACATTCACTT
CTGGGTAATCGTTGGTCATTAATTGCCGGACGATTACCTGGTCGAACAGATAATGAAATCAAGAATTATTGGAATACGCA
TTTGACCAAGAAGCTCAGAAGCACAGGAATTGAACCAAAACCCCACAAGAATTTGACCAAATTAAAGGAGAAATCAAGAA
AACAAACCAAAAAGGAGAAATCAAGAAAAGAAGTGGGGAAGAAAAGCAATGATGAGAAGTTGAAGGGTCAAATTGCACAA
GTTGAGAAGATAAAAGTATTTGCACCAAAGCCCATAAGGATTTCTTGTGGGATTTCAAGGAACAATAGTTTTGAAAATGA
TACATTGAGTACTACTACTTGTTCCTCAAATAGTAATTTTGAAAAAGTTGATGATGGAAAAGACAGGGAAAAAGAGGTGA
AGTTATTTCCAAGGGAATTAGATTTTGATGAATTACTTGAAGGGGGTGGATTTTATGATGAATTTCTTATGGGAGAAAGC
TGCAATTTTTCAAACAAAGTGGAAATGAATGATAATATGGTGGAAAAAGTATATGAAGAATATCTTCTACTTCTTTCTGA
AATTCAAGAAGATCAAACGGAGCAAAAATTCTCAATGTAA
GCATCTTCTTAGTTCTCTCTGTTCTGAAAATTTTTCTTTAGAAAAAACACACACAAAAAAAAATAAAAATGGGAAGAGCA
CCATGTTGTGCTAAAGAAGGATTGCGTAAAGGGCCATGGTCTACTAAAGAAGATTTATTACTTACTAATTATATCAATCA
ATATGGTGAAGGCCAATGGAGATCTTTGCCTAAAAATGCTGGATTGCTTAGGTGTGGGAAAAGTTGTAGATTAAGATGGG
TGAATTATTTAAAGCCAGGGATTAAAAGAGGAAATTTTAGTGAAGATGAAGAAGATCTTATAGTGAGATTACATTCACTT
CTGGGTAATCGTTGGTCATTAATTGCCGGACGATTACCTGGTCGAACAGATAATGAAATCAAGAATTATTGGAATACGCA
TTTGACCAAGAAGCTCAGAAGCACAGGAATTGAACCAAAACCCCACAAGAATTTGACCAAATTAAAGGAGAAATCAAGAA
AACAAACCAAAAAGGAGAAATCAAGAAAAGAAGTGGGGAAGAAAAGCAATGATGAGAAGTTGAAGGGTCAAATTGCACAA
GTTGAGAAGATAAAAGTATTTGCACCAAAGCCCATAAGGATTTCTTGTGGGATTTCAAGGAACAATAGTTTTGAAAATGA
TACATTGAGTACTACTACTTGTTCCTCAAATAGTAATTTTGAAAAAGTTGATGATGGAAAAGACAGGGAAAAAGAGGTGA
AGTTATTTCCAAGGGAATTAGATTTTGATGAATTACTTGAAGGGGGTGGATTTTATGATGAATTTCTTATGGGAGAAAGC
TGCAATTTTTCAAACAAAGTGGAAATGAATGATAATATGGTGGAAAAAGTATATGAAGAATATCTTCTACTTCTTTCTGA
AATTCAAGAAGATCAAACGGAGCAAAAATTCTCAATGTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g082890.2.1 | SL2.50ch08:65545829..65546931 | 284 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g082890.2 | SL2.50ch08:65545830..65546999 | 1,170 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g082890.2.1.1 | SL2.50ch08:65546799..65546999 | 201 | - | n/a |
| exon | exon:Solyc08g082890.2.1.2 | SL2.50ch08:65545830..65546548 | 719 | - | 2 |
| intron | intron:Solyc08g082890.2.1.2 | SL2.50ch08:65546549..65546798 | n/a | - | n/a |
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