Sol Genomics Network

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Solanum lycopersicum gene Solyc09g010080.2

Name Solyc09g010080.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc09g010080	Length 3,864

Description

Beta-fructofuranosidase, insoluble isoenzyme 1 (AHRD V1 ***- INV1_DAUCA); contains Interpro domain(s) IPR001362 Glycoside hydrolase, family 32

Location(s)

SL2.50ch09:3475480..3479343

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3864

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc09g010080.2.1	SL2.50ch09:3475480..3479343	2,002	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc09g010080.2 SL2.50ch09:3475480..3479343
ATTATTCTTCAATATCTTTCTCCAAAATCACAAAAAAAAAAAATGGAATTATTTATGAAAAACTCTTCTCTTTGGGGTTT
AAAATTTTATTTATTTTGCTTATTTATAATTTTATCAAACATTAATAGGGCATTTGCTTCTCATAATATTTTTTTGGACT
TGCAATCTTCAAGTGCTATTAGTGTCAAGAATGTTCATAGAACTCGTTTTCATTTTCAACCTCCTAAACATTGGATTAAT
GGTATGTTCATTTTTTTTTTATTTTATATAACATGCGATAAATTTAACGTTAGCAATGTGGTTTGTTATTTAAATTCGAA
TTTGATTATATGACTTTGCTTATATAAATATACATAGTAATAAAAGTTTGTGTATAAATGCATGTCATATACATTTATTG
ACTTGGTATATATATCAGTACGATTAAATTAATTGATGGTGCAATTAATATTGCATTATTTAGGTGATAAAACTACAGAA
ATAAACGAAAATATTTTTTTATATATAGAGAAGTTCAAATGTTGATGTTTCTTTTATGGTTACATTGTTTTAAAATGTTT
TTTTTTAACTATCTTTATAGCTACATATATATAAGATTGATCATTCTTTATATTTCAAAATTATATCTACATACACACAT
ATACATCATTATGTGGTTCATTTATGTTAGTTTTCAGTATTCGATATTTATTTTTAAGTTTAATTTATTTAAATCTGCGT
TAAAATATCTCACTTTTAAAGATAGAATCACTCCTGACCAACTATGAGTAACTCGATTCTCAAAATTTAAATTCGAAATT
AGATTAATTATCATGGCAAGAGAACTACAACGTTTTGGATAAGAATGTGCAAAAGAGAGAAAGAAACATGAAATATATAA
AAACCTAAGATTTTGGCCATGGAATTTAGGTGAAAATTAATTTGTTGAAGGCACCCTTTATTATTATTATTATAATTATT
ATTATTATTAATGAAATATAGTGACATTTCATACTCATATATTGTGTGCATTTAATTAATATATGTAGGTCTTATGTTAA
TTTAAACTTACCAAACATATTGTCTCTTATAAAGTTGACTCCCCCCCTCAACCCCCAACCCCCACCCCCACCCCCACCCC
ACCCAAAAAAATTACCTCATCAATTTCGTTTTTTATATGACACAATTTTCTTGTTTAATTTGTTATCTACAGAACGACTA
CTTTCTATATCATTCTACATAATATGTATATTTTTTATAATCACAATAAATCTCATGACACGTTTTCAGATCATAATTTT
GCAAACACCTTTTTCTTTATTTTTTAATTAGGTATATCACATAAATTAAAAGGATTCATTAATTTTCGCAGAGAAAACTA
ATTAGTTTCTGTGTTTTTCACCTTTCATTTATTAATTACTACATAATTTTTAATCAATAATTGATGAAAGACTATGTAAT
GTATTCTATTATCTTCACTAATCATTTTTTTTTTGTATAATTCTTATATGGTCTCTCTCCATTGGATGCCTTTCAAATAT
ACAAAGACCCTAATGGTAAGTTAGATTATTTTTCATTTAATTTTATCAATAACTCAATGATATTATTGATTTTCATTTTA
TTTTTCAAACAGCACCAATGTATTATAATGGAGTGTATCATTTATTCTATCAATACAATCCAAAAGGATCAGTATGGGGC
AATATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAA
ATTTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAG
TAGATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAA
CCTAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGG
CCAAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATT
TTATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCT
GTATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGA
TGTTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTG
ATGGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGG
GTTATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTAT
TCCGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGC
AAAAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGTTTCA
ACTTTTCCTTATTAAACTATAGTCTTTTAAATATCATTAATCTACTTCTTATATGTATAATCAATGTATAACTATTATAT
CAAATGCACATGATCGATTGATTATACATTTGCTATATATATATCTCTATTATATCAATTGCACTGTCTCATCTTGCATT
TCTTTGATCGTAGGCTGATGTTGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGG
CTGACCTATATGCCCAAGACGTTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACA
TTAGCTTCTAAAAACTTAGAAGAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCAT
GTGCTCAGATGCTAGAAGGTTTGTTTCTTCAATCCAATTAATTGTAATGATCGAAGTTCACATCTTCTCCAAATTGAGTA
AATCGAGAATTATAATGACCCGACTTTGATATCATGATAAGAAATGCATTTACTTATAGATCGCCCGTTAGTGTCATTAA
AAAACTCTAACCTTGTTTAGGTTTTTTTTTTTTTTAATTAATGAGCAGATCTTCCATGAGACAAAATGAAGCAATGTACA
AGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGTTATCTCTTAGGAGTTTGGTAAGTTTTGCT
TTCACAATTTTTATTTATTTATAATTTATTTGATCAAAACTTTCAAGATTCGATTAATTTGAAGAGTAACGATTTGTGTT
TGACTAATCAATTTGTATCATATGCATATTTTTTTTTAGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAA
AACATGCATAACATCAAGGGTGTATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTG
AGACAATCACAATTGAGACTCTGAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAA
TTATGTCTACAATTATATATGTCTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCT
ATAATTGTCTCTAATTTATTTTGGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATA
TTAAGTAAGAAATTTGTTAGCTTT

Download sequence region

Download sequence (3.8Kb)

Get flanking sequences on SL2.50ch09

mRNA Solyc09g010080.2.1

Ontology terms

terms associated with this mRNA

GO:0005975 – carbohydrate metabolic process

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc09g010080.2.1 Beta-fructofuranosidase, insoluble isoenzyme 1 (AHRD V1 ***- INV1_DAUCA); contains Interpro domain(s) IPR001362 Glycoside hydrolase, family 32
ATTATTCTTCAATATCTTTCTCCAAAATCACAAAAAAAAAAAATGGAATTATTTATGAAAAACTCTTCTCTTTGGGGTTT
AAAATTTTATTTATTTTGCTTATTTATAATTTTATCAAACATTAATAGGGCATTTGCTTCTCATAATATTTTTTTGGACT
TGCAATCTTCAAGTGCTATTAGTGTCAAGAATGTTCATAGAACTCGTTTTCATTTTCAACCTCCTAAACATTGGATTAAT
GACCCTAATGCACCAATGTATTATAATGGAGTGTATCATTTATTCTATCAATACAATCCAAAAGGATCAGTATGGGGCAA
TATTATTTGGGCTCATTCAGTCTCAAAAGACTTGATAAATTGGATCCATTTAGAACCTGCAATTTATCCATCCAAAAAAT
TTGACAAGTATGGTACTTGGTCTGGATCATCAACTATTTTACCTAATAACAAACCTGTTATCATATACACCGGAGTAGTA
GATTCGTATAATAATCAAGTCCAGAACTACGCCATCCCGGCTAACCTATCTGATCCATTTCTTCGTAAATGGATCAAACC
TAACAACAACCCGTTGATCGTCCCTGATAACAGTATCAATAGAACTGAGTTTCGCGATCCAACTACAGCTTGGATGGGCC
AAGATGGGCTTTGGAGGATTTTAATAGCAAGTATGAGAAAACATAGAGGGATGGCATTGTTGTATAGAAGTAGAGATTTT
ATGAAATGGATCAAAGCCCAACATCCACTTCATTCATCTACTAATACTGGAAATTGGGAGTGTCCTGATTTTTTCCCTGT
ATTATTTAATAGTACCAATGGTTTAGATGTATCGTATCGCGGAAAAAATGTTAAATATGTCCTCAAGAATAGTCTTGATG
TTGCTAGGTTTGATTATTACACTATTGGCATGTATCACACCAAAATAGATAGGTATATTCCGAATAACAATTCAATTGAT
GGTTGGAAGGGATTGAGAATCGACTATGGTAATTTCTATGCATCGAAGACATTCTATGATCCTAGCAGAAATCGAAGGGT
TATTTGGGGTTGGTCAAATGAATCCGATGTATTACCTGACGATGAAATTAAGAAAGGATGGGCTGGAATTCAAGGTATTC
CGCGACAAGTATGGCTAAACCTTAGTGGTAAACAATTACTTCAATGGCCTATTGAAGAATTAGAAACCCTAAGGAAGCAA
AAGGTCCAATTGAACAACAAGAAGTTGAGCAAGGGAGAAATGTTTGAAGTTAAAGGGATCTCAGCATCACAGGCTGATGT
TGAAGTGCTGTTCTCATTTTCAAGTTTGAACGAGGCCGAACAATTTGATCCTAGATGGGCTGACCTATATGCCCAAGACG
TTTGTGCCATTAAGGGTTCGACTATCCAAGGTGGGCTTGGACCATTTGGGCTTGTGACATTAGCTTCTAAAAACTTAGAA
GAATACACACCTGTTTTCTTCCGAGTGTTCAAGGCTCAAAAAAGTTATAAGATTCTCATGTGCTCAGATGCTAGAAGATC
TTCCATGAGACAAAATGAAGCAATGTACAAGCCCTCATTTGCTGGATATGTAGATGTAGATTTAGAAGACATGAAGAAGT
TATCTCTTAGGAGTTTGATTGATAACTCAGTAGTGGAAAGTTTCGGTGCTGGTGGCAAAACATGCATAACATCAAGGGTG
TATCCAACTTTAGCGATTTATGATAATGCACATTTATTTGTTTTTAACAATGGCTCTGAGACAATCACAATTGAGACTCT
GAATGCTTGGAGCATGGATGCATGTAAGATGAACTAAATATTTTCAAAAAAATTGGAATTATGTCTACAATTATATATGT
CTAAAGAGACAAAAATTGTGTTAAATTTAACAGTAGATGATGTTCACAAAAATCCTCTATAATTGTCTCTAATTTATTTT
GGTGAATTTAGAAGGCAAAGTGTGTGTATGGATTTTTCTAGTACCATATATATATATATTAAGTAAGAAATTTGTTAGCT
TT

Download sequence (2.0Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc09g010080.2.1	SL2.50ch09:3475521..3479138	585	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc09g010080.2	SL2.50ch09:3475480..3479343	3,864	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc09g010080.2.1.1	SL2.50ch09:3475480..3475720	241	+	n/a
exon	exon:Solyc09g010080.2.1.2	SL2.50ch09:3477006..3477014	9	+	n/a
exon	exon:Solyc09g010080.2.1.3	SL2.50ch09:3477092..3478113	1,022	+	2
exon	exon:Solyc09g010080.2.1.4	SL2.50ch09:3478293..3478537	245	+	2
exon	exon:Solyc09g010080.2.1.5	SL2.50ch09:3478728..3478827	100	+	n/a
exon	exon:Solyc09g010080.2.1.6	SL2.50ch09:3478959..3479343	385	+	1
intron	intron:Solyc09g010080.2.1.1	SL2.50ch09:3475721..3477005	n/a	+	n/a
intron	intron:Solyc09g010080.2.1.2	SL2.50ch09:3477015..3477091	n/a	+	n/a
intron	intron:Solyc09g010080.2.1.3	SL2.50ch09:3478114..3478292	n/a	+	n/a
intron	intron:Solyc09g010080.2.1.4	SL2.50ch09:3478538..3478727	n/a	+	n/a
intron	intron:Solyc09g010080.2.1.5	SL2.50ch09:3478828..3478958	n/a	+	n/a

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Related views

Genetic loci

Tomato locus lin5 (invertase 5)

http%3A%2F%2Fsolgenomics.sgn.cornell.edu%3A8080%2Ffeature%2F17922386%2Fdetails feature 17922386

Please wait, checking for comments about feature 17922386

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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