Sol Genomics Network

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Solanum lycopersicum gene Solyc09g010090.2

Name Solyc09g010090.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc09g010090	Length 3,615

Description

Beta-fructofuranosidase insoluble isoenzyme 2 (AHRD V1 **-- B6U1H5_MAIZE); contains Interpro domain(s) IPR018053 Glycoside hydrolase, family 32, active site IPR013148 Glycosyl hydrolases family 32, N-terminal IPR001362 Glycoside hydrolase, family 32

Location(s)

SL2.50ch09:3480545..3484159

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3615

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc09g010090.2.1	SL2.50ch09:3480545..3484159	2,125	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc09g010090.2 SL2.50ch09:3480545..3484159
CATTCCCATGTTTCTTTTCTCCTTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCA
AAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTT
AGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAA
ATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGGTATGTTTATT
CCTTTTTTTCGTCTTTTTTTTATATATATATATAATAAAACGAACATGTTGTGTTTAGTCTAGATTTAATACTAGTGATT
TTTTTGACGCTAACAAATAATCGAGTACTCACCATTTGTCAATAGATACATTGACATGTATTAGTATGATTTTCGTCTTT
TTTCGTTGTTTCTAATATTATTTAATCTTCACTAATTTTTTTTATTTTTCTTTGAATGATGTCTCTTGGTCAAAACATAC
AATAGATCCCAATGGTAAGTTAACTATATTTTTGTATATTTTTTAAATTTATTTTATTCTTATTATATAATATAGGGAAA
AAAGGATAAATATATCCCCGAACTATTATAAATAGTATGCACCAGTATCCTCTGTTATACTTTAGAGACATTTTTGCCGT
CAAAAAACTAGAACACATATATCCTTTATTTATCCCGATATCGAATCGATTGTACCACGAGTGAAGGGTATAGCTCTAGT
TTTTGGACGGTAGGGCACCTAAAGTATGACGAAGAATATCTGCAAACCATTTACAATAGTTTTGGATATATTTGTGAACT
AATGATGTTTGAATTCTTTTTTCATAGCACCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAAT
GGTTCAGTATGGGGTAACATTGTTTGGGCTCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAAT
TTACCCATCAAAGCCATTTGATCAATTCGGTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCT
TGTACACCGGAATCATAGATGCCAACCAAACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTC
CGCGAATGGATCAAGCCAGACAACAACCCATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAAC
AACAGCATGGATGGGTAAAGACGGGCATTGGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAA
TGTATAGGAGCAAAGACTTTATGAAATGGGTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAA
TGCCCTGATTTTTACCCAGTTTCATCGAAAGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAA
GAACAGTATGGATCTTACTCGATTTGAGTATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATC
CAGATTCTGTCGATAGTTTGAAGGGATTGAGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGC
AAAAATCGAAGGGTTATCTGGGGTTGGTCTAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGG
GATTCAATTGATTCCTCGTAAAGTATGGCTTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAA
CCCTAAGAACTCAAAAGGTTCAATTGAGCAACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCA
GCACAGGTATATATATAGACTTTTTTATTTTTAATTTATTATTATTATTATTATTACTCTCTCCGTTTTCAAAAAAAAAA
TATCCCTATTTTCTTTTATAGTCTCTTTAATTTAAAAAGAATGATCTATTTTCTTTTTGGATAACCTTTTAACTTTGATT
TTTCACGTGAAATGTTTAAAATCACGAGATTAAAGAGCATTTTGGTTACATTTGACATAACTGAAATTTAGAAACACAAG
ATTAAAGGACATTTTGGTACATTTGACATAACTTGAATTTAAAACCACATAATTAAAGGGCATTTTGGTACATTTGAATT
AGAACATTTTGATACATTTGACATAACATGAATTTAGAACCACAAGATTAAAAAATCTTCTTTCTTTTTTCTTAAATTTC
GTTCCAAGTCAAATTAGGTCATTCTTTTTTAATTACTCCCTCCGTCTAATTTTATGTAACAACATTTGACCGGACGGAGA
GTTTTAAGAAATAAATAAAACACTTTGAGATGTGTACCAAATTGCTCTCCAAAAATACTCACTTTTCTCTCTCCTCATAA
ATGTATTTGAGTACTATTTTTAAAATTAAGCGAGTCCAACAAGAATAAAATAGAAACTGTACTTTTAAATATTTACCATA
TAAAAAAATGTGATTTTTTTTTTTTGAAAACTGATCAAAAAGAAAATGATATCACTCGACGATGAAAGTGTTTAATAATG
AAAAAACATGACAGGCTGATGTTGAAGTGACATTCTCATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGG
AATGATATGTATGCACAAGATGTTTGTGGACTCAAGGGTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTAC
ATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTTTTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCT
TGTGTTCTGACGCTAAAAGGTACTACTTATTGAATTTTTAACTTGTTGGTAACGTTTTCGACGGTATAATATCGAGAAGT
TGAGAAATTGACAAATCTTTTGTTTTATGTCTGATAGGTCAACTCTTAAGTTCAATGAAACAATGTACAAAGCTTCATTT
GCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGGTAACTTCTCTTTCTATCGTTAATCA
AAAATCTAAACGAACATTTGAATCTAAACTATTGAAATTCTTTTTGTAGATTGATAATTCAGTTATAGAAACTTTTGGTG
CTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATTAACGACGAGGCACATTTATTCGCGTTTAAC
AACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGGCAAAGCTAAGATACAATATTGAAGAAAAAA
AAAAGAATAAGGAGAAAGGAACTATGGTAAAAGGGGGAAATATGAGATTTTGATGGACATATAAGAGTTTGTTATTTTGA
TATTTCAACTCTATTTTTTTTGTTTATCAAATTAGATATCCCTCGAGTCAAAAAAAATGTATATAGATTTATCCTCTATT
TTCAATTTATGACAATAATGCTATGTTTTTGCTTTCAAAATTGTTGTTTTCGTTATATTATTTGTTCAATCGTGTATTTA
TTTTATTGATATATC

Download sequence region

Download sequence (3.6Kb)

Get flanking sequences on SL2.50ch09

mRNA Solyc09g010090.2.1

Ontology terms

terms associated with this mRNA

GO:0005975 – carbohydrate metabolic process

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc09g010090.2.1 Beta-fructofuranosidase insoluble isoenzyme 2 (AHRD V1 **-- B6U1H5_MAIZE); contains Interpro domain(s) IPR018053 Glycoside hydrolase, family 32, active site IPR013148 Glycosyl hydrolases family 32, N-terminal IPR001362 Glycoside hydrolase, family 32
CATTCCCATGTTTCTTTTCTCCTTATCCAAAAAAAAAAAAATTAAAAAAAATTATTTAGATTAAATATCACTATCTGTCA
AAGCCCAATCATTAAAATAAAATAAAAATTATGGATTATTCATCTAATAAAAGTTCTCGTTGGGCTTTGCCAGTTATCTT
AGTTTGCTTTTTTGTAATTTTATTATCCAATAATGTTGTTTTTGCTTCTCATAAAGTTTTTATTCACTTGCAATCTCAAA
ATGCTGTAAATGTTCATACTGTTCATCGAACTGGTTATCATTTTCAGCCCGAAAAACATTGGATCAATGATCCCAATGCA
CCAATGTATTTCAATGGAGTGTATCATCTATTCTACCAGTACAACCCAAATGGTTCAGTATGGGGTAACATTGTTTGGGC
TCATTCCGTTTCAAAAGACTTGATCAATTGGATCAATTTAGAACCTGCAATTTACCCATCAAAGCCATTTGATCAATTCG
GTACCTGGTCTGGATCAGCAACCATCCTACCTGGTAACAAGCCAGTCATCTTGTACACCGGAATCATAGATGCCAACCAA
ACCCAAGTCCAAAACTACGCAATCCCAGCTAACTTATCCGATCCATATCTCCGCGAATGGATCAAGCCAGACAACAACCC
ATTAATTATAGCCGATGAAAGTATCAACAAGACCAAGTTTCGTGACCCAACAACAGCATGGATGGGTAAAGACGGGCATT
GGAGAATCGTCATGGGAAGTTTGAGGAAACACAGCAGGGGCTTAGCTATAATGTATAGGAGCAAAGACTTTATGAAATGG
GTCAAGGCTAAACACCCACTTCACTCAACTAACGGCACTGGAAACTGGGAATGCCCTGATTTTTACCCAGTTTCATCGAA
AGGTACTGATGGGTTGGATCAATACGGTGAGGAACACAAGTACGTGCTGAAGAACAGTATGGATCTTACTCGATTTGAGT
ATTATACACTTGGAAAATACGATACGAAAAAAGATAGGTACGTTCCAGATCCAGATTCTGTCGATAGTTTGAAGGGATTG
AGACTCGATTACGGTAACTTCTACGCATCGAAGTCATTCTACGATCCAAGCAAAAATCGAAGGGTTATCTGGGGTTGGTC
TAATGAATCAGATATATTCCCAGAGGATGATAATGCGAAGGGATGGGCTGGGATTCAATTGATTCCTCGTAAAGTATGGC
TTGATCCAAGTGGTAAGCAGTTGGTTCAATGGCCTGTGGAGGAACTAGAAACCCTAAGAACTCAAAAGGTTCAATTGAGC
AACAAGAAGATGAACAATGGGGAGAAGATTGAAGTTACAGGAATCACACCAGCACAGGCTGATGTTGAAGTGACATTCTC
ATTTGCAAGTTTGGATAAGGCAGAGTCATTTGATCCTAAATGGAATGATATGTATGCACAAGATGTTTGTGGACTCAAGG
GTGCAGATGTTCAAGGTGGGCTTGGGCCATTTGGTCTTGCTACATTAGCTACTGAAAACTTGGAAGAAAACACACCGGTT
TTCTTCCGAGTTTTCAAAGCACAGCAAAACTACAAGGTTCTCTTGTGTTCTGACGCTAAAAGGTCAACTCTTAAGTTCAA
TGAAACAATGTACAAAGCTTCATTTGCTGGATTTGTTGATGTTGATTTGGCTGACAAGAAATTGTCACTCAGAAGCTTGA
TTGATAATTCAGTTATAGAAACTTTTGGTGCTGGTGGAAAGACATGTATAACATCGAGGGTTTATCCAACATTGGCAATT
AACGACGAGGCACATTTATTCGCGTTTAACAACGGAACGGAGCCAATCACAATTGAGAGTTTGGATGCATGGAGTATGGG
CAAAGCTAAGATACAATATTGAAGAAAAAAAAAAGAATAAGGAGAAAGGAACTATGGTAAAAGGGGGAAATATGAGATTT
TGATGGACATATAAGAGTTTGTTATTTTGATATTTCAACTCTATTTTTTTTGTTTATCAAATTAGATATCCCTCGAGTCA
AAAAAAATGTATATAGATTTATCCTCTATTTTCAATTTATGACAATAATGCTATGTTTTTGCTTTCAAAATTGTTGTTTT
CGTTATATTATTTGTTCAATCGTGTATTTATTTTATTGATATATC

Download sequence (2.1Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc09g010090.2.1	SL2.50ch09:3480654..3483896	584	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc09g010090.2	SL2.50ch09:3480545..3484159	3,615	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc09g010090.2.1.1	SL2.50ch09:3480545..3480853	309	+	n/a
exon	exon:Solyc09g010090.2.1.2	SL2.50ch09:3481110..3481118	9	+	n/a
exon	exon:Solyc09g010090.2.1.3	SL2.50ch09:3481452..3482470	1,019	+	2
exon	exon:Solyc09g010090.2.1.4	SL2.50ch09:3483199..3483443	245	+	2
exon	exon:Solyc09g010090.2.1.5	SL2.50ch09:3483542..3483638	97	+	n/a
exon	exon:Solyc09g010090.2.1.6	SL2.50ch09:3483714..3484159	446	+	1
intron	intron:Solyc09g010090.2.1.1	SL2.50ch09:3480854..3481109	n/a	+	n/a
intron	intron:Solyc09g010090.2.1.2	SL2.50ch09:3481119..3481451	n/a	+	n/a
intron	intron:Solyc09g010090.2.1.3	SL2.50ch09:3482471..3483198	n/a	+	n/a
intron	intron:Solyc09g010090.2.1.4	SL2.50ch09:3483444..3483541	n/a	+	n/a
intron	intron:Solyc09g010090.2.1.5	SL2.50ch09:3483639..3483713	n/a	+	n/a

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Related views

Genetic loci

Tomato locus lin7 (invertase 7)

http%3A%2F%2Fsolgenomics.sgn.cornell.edu%3A8080%2Ffeature%2F17922399%2Fdetails feature 17922399

Please wait, checking for comments about feature 17922399

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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