Solanum lycopersicum mRNA Solyc12g005640.1.1
 mRNA details
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| Name | Type | Organism | |
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Synonyms / aliases
mRNA:Solyc12g005640.1.1
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Length
702
|
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Description
Myb-related transcription factor (AHRD V1 *--- B5RHV2_MUSBA); contains Interpro domain(s) IPR015495 Myb transcription factor
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Location(s)
SL2.50ch12:338253..339740
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 1488
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc12g005640.1.1 Myb-related transcription factor (AHRD V1 *--- B5RHV2_MUSBA); contains Interpro domain(s) IPR015495 Myb transcription factor
ATGGCAAGAATACGTTGTTATGACAAAAAAAGTGGATTAAAAAAGGGTACTTGGACACTTGAAGAAGATAAAAAATTAGC
AGCTTATGTTAATAAATATGGCTGTTGGAATTGGCGTCAACTTCCAAAGTTTGCTGGATTATCAAGGTGCGGAAAGAGCT
GCAGATTAAGATGGCTTAATTATCTTCGGCCAAATATTAAAAGAGGAAACTACACTAGAGAAGAAGACCAGATCATCATG
AAGCTTCATGCAGAAATTGGGAATAAATGGTCAGCGATTGCTATTCACTTACCAGGAAGATCAGACAATGAAATAAAAAA
TCATTGGCACACATCTCTCAAGAAAAGATCAAAACATGAATTAACAATATCTAATGGAAAAAAGAGAGAGGCAAGTAATG
TCAATCAAAAAAGTGATGAAGACCAAAATATTACACCAAATGAATCATATAGTGAAGTTTCTCCTTGTGTTACAATTGAC
CAAAATATGGAAGATATTATGGATGGAAAATGTGAGATGATTCAAGAAAAATCATTTGAAGAATGCATTGGAAATTTTTG
GACAGAACCATTTTTAATAGATAGTTTTAATAGTACTACTAATAATAATACTGAATTTTGTGTGCCTTTAGAAGTTGAGT
ATGGACTATTTATATCTCCATTTTCTCCTATTATGTGTTATGATGAATTTCTATGCTCATAA
ATGGCAAGAATACGTTGTTATGACAAAAAAAGTGGATTAAAAAAGGGTACTTGGACACTTGAAGAAGATAAAAAATTAGC
AGCTTATGTTAATAAATATGGCTGTTGGAATTGGCGTCAACTTCCAAAGTTTGCTGGATTATCAAGGTGCGGAAAGAGCT
GCAGATTAAGATGGCTTAATTATCTTCGGCCAAATATTAAAAGAGGAAACTACACTAGAGAAGAAGACCAGATCATCATG
AAGCTTCATGCAGAAATTGGGAATAAATGGTCAGCGATTGCTATTCACTTACCAGGAAGATCAGACAATGAAATAAAAAA
TCATTGGCACACATCTCTCAAGAAAAGATCAAAACATGAATTAACAATATCTAATGGAAAAAAGAGAGAGGCAAGTAATG
TCAATCAAAAAAGTGATGAAGACCAAAATATTACACCAAATGAATCATATAGTGAAGTTTCTCCTTGTGTTACAATTGAC
CAAAATATGGAAGATATTATGGATGGAAAATGTGAGATGATTCAAGAAAAATCATTTGAAGAATGCATTGGAAATTTTTG
GACAGAACCATTTTTAATAGATAGTTTTAATAGTACTACTAATAATAATACTGAATTTTGTGTGCCTTTAGAAGTTGAGT
ATGGACTATTTATATCTCCATTTTCTCCTATTATGTGTTATGATGAATTTCTATGCTCATAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc12g005640.1.1 | SL2.50ch12:338252..339740 | 234 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc12g005640.1 | SL2.50ch12:338253..339740 | 1,488 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc12g005640.1.1.1 | SL2.50ch12:339605..339740 | 136 | - | n/a |
| exon | exon:Solyc12g005640.1.1.2 | SL2.50ch12:338868..338997 | 130 | - | 2 |
| exon | exon:Solyc12g005640.1.1.3 | SL2.50ch12:338253..338688 | 436 | - | 1 |
| intron | intron:Solyc12g005640.1.1.2 | SL2.50ch12:338998..339604 | n/a | - | n/a |
| intron | intron:Solyc12g005640.1.1.3 | SL2.50ch12:338689..338867 | n/a | - | n/a |
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| Related views |
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