Sol Genomics Network

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Arabidopsis thaliana mRNA AT5G62470.1

Name AT5G62470.1	Type mRNA	Organism Arabidopsis thaliana
Synonyms / aliases MYB96, MYBCOV1, ATMYB96	Length 1,499

Description

myb domain protein 96

Location(s)

TAIR10ch05:25078991..25080858

GFF source

TAIR10

mRNA sequence

spliced mRNA sequence, including UTRs

>AT5G62470.1 myb domain protein 96
ATGGGAAGACCACCTTGCTGTGAAAAGATTGGAGTGAAGAAAGGGCCATGGACACCAGAGGAAGACATCATCTTGGTTTC
TTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTCCCAACACACACAGGTTTAAGATGTAGCAAGAGCTGCAGAT
TGAGATGGACTAATTATCTTCGACCCGGTATTAAGCGTGGAAATTTTACTGAGCATGAAGAGAAGACAATTGTTCATCTT
CAAGCCCTTTTAGGCAACAGATGGGCAGCCATAGCATCATACCTTCCAGAAAGGACAGACAATGATATAAAGAACTATTG
GAACACTCACTTGAAGAAGAAGCTCAAAAAGATTAATGAATCTGGTGAAGAAGATAATGATGGTGTCTCTTCATCAAACA
CTAGTTCACAAAAGAACCATCAAAGCACTAACAAAGGTCAATGGGAAAGAAGACTTCAGACAGACATTAACATGGCAAAA
CAAGCTCTTTGTGAGGCCTTGTCTTTAGACAAACCATCATCCACTCTTTCATCATCTTCATCATTACCGACACCAGTAAT
CACACAACAAAACATCCGTAACTTCTCATCAGCTTTGCTTGACCGTTGTTATGATCCATCCTCTTCTTCTTCATCTACCA
CAACCACCACTACAAGCAACACTACTAATCCATACCCATCAGGGGTATATGCGTCAAGTGCTGAGAACATCGCCCGGTTG
CTTCAAGATTTCATGAAAGACACACCCAAGGCTTTAACTTTATCATCTTCATCTCCGGTTTCAGAGACTGGACCACTCAC
TGCTGCAGTCTCGGAAGAAGGTGGAGAAGGGTTTGAACAATCTTTCTTCAGCTTCAATTCAATGGACGAAACTCAAAACT
TGACTCAGGAGACAAGCTTCTTCCATGATCAAGTGATCAAACCGGAAATAACAATGGACCAAGATCATGGTCTAATATCA
CAAGGGTCTCTGTCTTTGTTTGAGAAATGGTTATTTGATGAGCAAAGCCACGAGATGGTTGGTATGGCACTAGCAGGACA
AGAAGGGATGTTCTAGTTCTAGAAGACTGTCTAGAACTAACAAAGTGGGATCTTTTTAAAATTGAGGGCTTAATTAGTTA
TGAGTTATAACAAATAATATAGAGTTATAACCTATGATATATATGCTTATTATTGCTTTAGGGTTTTAGAGTCTTTAGTA
GCTAGCTTTTAGCTCTACAACACTCTTTTCCCCTTTTGGTGATATAAATCTCTCTTTTTCTATAAATATAAAAAAATTGT
ATGTAGCAGAACGTAACAAATGTATTGTGTTTCACTTTGTGGCTCATATGGTTATGCAAATGTCTCTTGATGCTCATATG
GAACATATACTTGACACACAAAATTCGTCATTGTAAGGTTTATTTTCTACCTTTAAGTGTAACTTCTTAAAGATGCATTC
TATTTCACATGCGGTTTTATGACATATTTATGAGATTGTCCATCCAAACTTTTGGATCC

Download sequence (1.5Kb)

Genomic sequence(s)

unprocessed genomic sequence underlying each location of this mRNA

>AT5G62470.1 TAIR10ch05:25080858..25078991 (sequence from reverse strand)
ATGGGAAGACCACCTTGCTGTGAAAAGATTGGAGTGAAGAAAGGGCCATGGACACCAGAGGAAGACATCATCTTGGTTTC
TTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTCCCAACACACACAGGTTTGTTTTGTTTCTTAATCAAATTAA
CTAATTAATAGATTAATTAAACTTTTGATCCACCTCTTAAACCCTTTTTATGTATTTATCTTGAAAGTGTACTAGGGGTT
GTGATTTCTTCTCTTTTTTATTTCTTTCTCTGGCTTGGTTGGTATGAACATTTAATAAAAGTGTAATAAATAGCTAATAA
GTTATGTCACCGACTCTTTCGTCCACATATCTCTAATTACCATTTAATCCCTTTTTCCTTGAGTTAATTGTTTTGTTAAT
ATGGTGTTTTAGGTTTGAGAAGATGTAGCAAGAGCTGCAGATTGAGATGGACTAATTATCTTCGACCCGGTATTAAGCGT
GGAAATTTTACTGAGCATGAAGAGAAGACAATTGTTCATCTTCAAGCCCTTTTAGGCAACAGGTATATTTTAATGCACAT
GATCCATATTTTTCCAAAAAGTTACCTTTCTTGGGTATAAGATCTAAATATGTTTTTCTTTGTATATAGATGGGCAGCCA
TAGCATCATACCTTCCAGAAAGGACAGACAATGATATAAAGAACTATTGGAACACTCACTTGAAGAAGAAGCTCAAAAAG
ATTAATGAATCTGGTGAAGAAGATAATGATGGTGTCTCTTCATCAAACACTAGTTCACAAAAGAACCATCAAAGCACTAA
CAAAGGTCAATGGGAAAGAAGACTTCAGACAGACATTAACATGGCAAAACAAGCTCTTTGTGAGGCCTTGTCTTTAGACA
AACCATCATCCACTCTTTCATCATCTTCATCATTACCGACACCAGTAATCACACAACAAAACATCCGTAACTTCTCATCA
GCTTTGCTTGACCGTTGTTATGATCCATCCTCTTCTTCTTCATCTACCACAACCACCACTACAAGCAACACTACTAATCC
ATACCCATCAGGGGTATATGCGTCAAGTGCTGAGAACATCGCCCGGTTGCTTCAAGATTTCATGAAAGACACACCCAAGG
CTTTAACTTTATCATCTTCATCTCCGGTTTCAGAGACTGGACCACTCACTGCTGCAGTCTCGGAAGAAGGTGGAGAAGGG
TTTGAACAATCTTTCTTCAGCTTCAATTCAATGGACGAAACTCAAAACTTGACTCAGGAGACAAGCTTCTTCCATGATCA
AGTGATCAAACCGGAAATAACAATGGACCAAGATCATGGTCTAATATCACAAGGGTCTCTGTCTTTGTTTGAGAAATGGT
TATTTGATGAGCAAAGCCACGAGATGGTTGGTATGGCACTAGCAGGACAAGAAGGGATGTTCTAGTTCTAGAAGACTGTC
TAGAACTAACAAAGTGGGATCTTTTTAAAATTGAGGGCTTAATTAGTTATGAGTTATAACAAATAATATAGAGTTATAAC
CTATGATATATATGCTTATTATTGCTTTAGGGTTTTAGAGTCTTTAGTAGCTAGCTTTTAGCTCTACAACACTCTTTTCC
CCTTTTGGTGATATAAATCTCTCTTTTTCTATAAATATAAAAAAATTGTATGTAGCAGAACGTAACAAATGTATTGTGTT
TCACTTTGTGGCTCATATGGTTATGCAAATGTCTCTTGATGCTCATATGGAACATATACTTGACACACAAAATTCGTCAT
TGTAAGGTTTATTTTCTACCTTTAAGTGTAACTTCTTAAAGATGCATTCTATTTCACATGCGGTTTTATGACATATTTAT
GAGATTGTCCATCCAAACTTTTGGATCC

Download sequence region

Download sequence (1.9Kb)

Get flanking sequences on TAIR10ch05

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	AT5G62470.1	TAIR10ch05:25079434..25080858	351	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	AT5G62470	TAIR10ch05:25078991..25081101	2,111	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon-auto18371429	TAIR10ch05:25080722..25080858	137	-	n/a
exon	exon-auto18371430	TAIR10ch05:25080317..25080439	123	-	n/a
exon	exon-auto18371431	TAIR10ch05:25078991..25080229	1,239	-	n/a

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Related views

Genetic loci

http%3A%2F%2Fsolgenomics.sgn.cornell.edu%3A8080%2Ffeature%2F18371427%2Fdetails feature 18371427

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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