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Tomato locus beta-galactosidase 6
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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![]() ![]() | [Associate accession] |
Accession name:
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![]() ![]() | View beta-galactosidase 6 relationships in the stand-alone network browser |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc02g084720.2 SL2.50ch02:47824752..47818628 (sequence from reverse strand)
TGCACATTATAGTTTTGAGGTGGAGGAAGAGGCAATTACTTGGACACAAGCACTGTGGTTGATCTTCAAAGCAAAAGTGG
ACTGACTTGCTGTGCACCCACATTGCAATTAAGCCTACCCTCCATAAATTTTCACCTTTTTGTTCCAAGATTCTTGATCT
TGCTTCAAATTTCCCTCCACCCAGAAAGGAAAGTTGTGTTCTTGGATGTGTTTGTAAGATTAAAAAAAAAGAGAAAAAAA
GGGAGGTGGAATCATGGAGGTTAACTCACTTCAGAAGTGGGTTCTGCTATGGTGTATAGTATTGTTTATTAGCTCTGGGT
TGGTTCACTGTGATGTTACATATGATAGGAAAGCTATTGTGATTAATGGGCAAAGAAGATTACTTTTCTCTGGTTCTATA
CATTACCCTAGAAGTACCCCTGAGGTACTTCAATTCTTGCCCATTTATGCTCTCTTTTTTCTTTTTACTGTGAAAGTGTT
TATGAAGTGAGCTTTAAAATGTGGTTTTGTAGATGTGGGAAGATCTGATAAACAAGGCAAAAGAAGGGGGTTTGGATGTG
GTTGAGACCTATGTCTTTTGGAATGTTCATGAGCCTTCTCCTGGCAATGTACTTCATTCCTTTCTTATTTCTGTTCAAAT
TAGCTTGTCTTCATTCATGTTTTGTGCTCAAAGATTAAATCTTTTTTTTTGGGTGTTTTCAGTACAATTTTGAAGGAAGA
TATGACCTGGTGAGGTTTGTAAAAACGATTCAGAAAGCAGGGCTGTATGCTCATCTTCGAATTGGCCCTTACGTTTGTGC
AGAGTGGAATTTTGGGTACATTTCTTCTTTTTTTCTCTCTCTTCACTAGATCTATAAAACATGTTCATACCAAGAGGTAC
TAATTTTTACTGTTAAATTCCACAGAGGGTTTCCAGTATGGCTGAAGTATGTACCTGGCATTAGCTTCAGAGCTGATAAT
GAACCTTTCAAGGTTTCAGCCTTCTCCTGAAAATAATTGAAAAAAAAGAAATTCACCATTAGAAGATTATCATTTTAAAT
GGAGGATAGTTAATGAAATTTAATTGTTTTATGGATTGACAGAACGCAATGAAAGGGTATGCTGAGAAAATTGTTAACTT
GATGAAGAGTCATAATCTTTTCGAGTCTCAGGGTGGTCCAATCATACTCTCACAGGTTGTTTATCTTTCAGGATTTTTTA
TTCCAATTAGTTCATTATACTCTACAATTCTTGTGTTTGCTGAAGCCTAATTCCACTAAAACTAGTTCAATTCTCATGTA
ACCTTTCTGTCTGATCTGCTACTGCAGATTGAGAATGAGTATGGGCCTCAAGCCAAGGTACTTGGAGCACCGGGACATCA
GTATTCAACATGGGCTGCAAATATGGCAGTTGGATTAGACACAGGCGTCCCATGGGTGATGTGCAAGGAAGAAGATGCAC
CAGATCCTGTGGTAAGCAAACATAGTTGTTAGAGCTTCCCATACTCCATTTGGCTTTGTTTTGTAGCATGTTCTAGTTTA
GTTTAACTTACATACACCTGTCAATCTTGCTATAAAAGTTACCTGTAATTAGCTTTTAAATGACCTAATTTTACACTTAA
GTGCATATTAGTTAACCTCCTCCTAATGAGCCAAACAGTTCTGCTCTTATCGATCCTCTCCAATTTTGCTTCAGTTTCTA
ATAAAAATCCAAAAATTTTACAACTGATTAGCTCTCTACAACTTCTTAAACAACTTTTTCTTATTGCTGATAACAGATCA
ACACATGCAATGGTTTCTACTGTGATAATTTCTTCCCAAACAAACCATACAAACCTGCAATTTGGACTGAAGCTTGGAGT
GGATGGTAAATCTTGTCTCTTCCTTTAAACTTTTGATTATATTTGAAGTTGGGTCATTTTTGACTTGTTTTCTCAATAAA
TTTAAGGTTCTCGGAATTTGGCGGTCCCCTTCATCAGAGACCAGTTCAGGATTTGGCATTTGCTGTTGCCCAATTTATAC
AAAGAGGAGGATCTTTTGTTAACTATTACATGGTTAGTTCCATTTCACTACTTCGGCTAATGCCTGATGTGGAGAAGTCA
TACTTCTTCTTTATAAATCGAAAGCATGCTTGAAGTCCCATATAGTAACAACATTTCCTCTCTTTGCCTAACAGTACCAT
GGGGGCACGAACTTTGGACGCACTGCGGGTGGGCCATTCATCACTACCAGCTATGATTATGATGCTCCAATTGATGAGTA
TGGTGAGTGTAGAGCTGTTGTTTCCTCTTTACTTCTCTTCTCTTGTAGATTTAAACTCACATGCCTTGAGTATTATTTAA
GGAGTTGTGATGGTCTTCGAAATTGTGGATTGTTTCAGTGAGACCATGTTTCCTTCACTGATATTTGTTCTATAAGGATT
TCCTTCTCTAATTTGTGTACGCTTTAAAAGCTTTGTAGCATAAAAATTTGCCTGTCATTATTCAATTCCGCTTAACTGTA
AGGAGTCCTTTAAACTCCCTTCCATTCAACAGGTTTGATCAGACAGCCAAAATATGGTCATCTCAAGGAGCTTCATAGAG
CTGTCAAGATGTGTGAGAAATCCATAGTTTCTGCAGATCCAGCAATCACATCCTTGGGAAACCTTCAACAAGTACATAAT
TCTGCATAAACATCTGTAATCTTGTAACTATGGTTCATTGTAATTTGTCTCTCATTGAATATTCTCTGTTGCTGTAGGCA
TATGTGTACTCTTCAGAGACAGGGGGTTGTGCAGCTTTCTTGTCAAACAATGACTGGAAATCTGCTGCTAGAGTAATGTT
CAATAATATGCACTATAATTTGCCTCCTTGGTCCATTAGCATCCTTCCTGATTGCAGAAATGTAGTCTTCAACACGGCCA
AAGTACGTAATACACCCGTGTGGGAACTTCTGTACATTCAATAGTACTCATGAGCTGCTTTAGCATCCTCCGAAAGATAT
AGTTCATTTATGCTACTCGCTGACAACTCTGAAAGCAAGGATTTAACAGCTTTTAAATTCATATGTAGGTTGGAGTTCAA
ACATCAAAGATGGAAATGCTACCGACTAACTCAGAGATGCTATCTTGGGAGACTTACAGTGAAGATATATCTGCATTAGA
TGACAGCTCATCAATTAGGTCTTTTGGTCTCTTGGAGCAAATAAATGTAACCAGAGATACAAGTGATTATTTGTGGTACA
TAACTAGGTGAGTTTGGTTTTGTATCTGACTATTAAACCTGTTTCCTCGATTTGCCTCTCATGGGGAATTGGATTGTCTG
CCAGTGCAAATGTTTTATTGCTCATCTCTTTTTACTGCACGACGTGTCTGAAGAGAAGGGGAGAATGGGAAGGGGGTTAC
AGGTGGAGGGTGGATTGTCTTGAAGTACCTCCTTTACAGAGAATAATGTGTTTTAATCTTCTAGGAAATTAAGTAAATGT
TCCACTCGCTCGAGGAGTATTTCTAGATGAATTGACACTTTCGGTTCTCATATTACTCATCCTTGCGACCTCTCCTACTT
CTTTGAACGCTTGTGACCTGAAAGCTGAAATTTTAGCTTTATGTGACATGTATGATGTTTTCCTCTGTTACAGTGTTGAT
ATTGGTTCAACTGAGTCCTTCTTGCATGGTGGAGAGCTCCCTACTCTTATAGTTGAGACAACAGGCCATGCTATGCATGT
GTTTATTAATGGTCAGCTCTCAGGTAATGCAGTCAATGTTACTTCATCAAAAGTATCTATGATTATGCTTAAACTTGCTA
ATTTCAATGAATGCTCCTACACATTTTAAAGGTTCTGCATTTGGGACAAGGAAGAATAGGAGATTTGTATTTAAAGGAAA
AGTCAATCTTCGTGCTGGCTCAAACAGAATTGCACTGCTTAGCGTGGCTGTCGGGCTGCCGGTTAGTTAATCCTCACCTT
CGGTCTTCCAAATAGCATGCATACCTGAGGTCAATTCAAGTTTGAGTAACTCATGAAGAAAATAAAATAAGTTTCTACGG
TTAAATAGCTTCAAATAAAGTCAACAATAAGTGTTGAGCATCACTAACATATATCAGAATCATTAATCAGCTGCAGTATC
ACTGATTACTATGCTAGCGCAAAAAACAAAATGCTGGTACCAGCAAGTGAAGAAAAGAAATAATTATTAGAGGTTACAAT
GTTGCATAGCTTAAAACTATTGAGCATGGGTTAATGGCTACTTTCGGCAGAGTTAATGATAATTTGTAGACAACGTTTTT
CCTTATTACCGCTGGGATTGGCAAAAGCATGAAACTTAAGCGCACAAGAAAATACAGCCTCACGTTGCTTACCTTGCAGT
GTAAGAAGGCCATTGTGCATTCTTTGATTGCTATATACCCGTGTGAGAGGAAGGTAATGTAAATTCTCCTTTCCCAGCAG
TAAAGGGATAGGAAAAAGTCTTATCAAAAAAGAAGGGATAGAAAACCAGTTCATCAGTGCAACTAGCTATTATCATCATG
ATCACTGATATGTTGAAGCAACACTTTGTAGCCTATTTACTGTCGTGAGATCATTTATACATTCTTTTTTAATGTACTCT
TGATTCTTAATATTTCTTTTTGTTTTCTGAAGAACATTGGTGGACATTTTGAAACATGGAGCACTGGCGTACTAGGTCCT
GTTGCAATTCAAGGACTTGACCATGGAAAATGGGACTTGTCCTGGGCAAAGTGGACATATCAGGTGCACTAACTTATAGC
CCTATTGTTCAATCAATCATCAATTACTTCAACTGCAACCTTTAACTGATATGGACTTACTAACAGGTTGGGCTTAAAGG
GGAGGCCATGAATCTTGTTTCGACAAATGGTATTTCTGCCGTTGACTGGATGCAAGGTTCATTAATTGCACAGAAACAAC
AACCCTTGACATGGCATAAGGTATGAAACTAGGAGTTAGGTTCCAAAGATGCAATTGATGGTAGTCATGTCTTACAACTC
ATCATATTGCAGGCTTACTTCAATACACCCGAAGGAGATGAGCCATTGGCTTTGGACATGAGCAGTATGGGTAAAGGTCA
AGTATGGATTAATGGCCAGAGTATTGGTAGATATTGGACTGCATATGCTACTGGAGATTGCAATGGGTGCCAATATTCTG
GAGTTTTTCGGCCTCCAAAATGTCAACTGGGATGTGGGGAACCAACTCAAAAATGGTAAGCCACTTCTTCCCAGCTATAC
ACTGCTTCCTGACAATTTGACAGAACACCATAAATAACTGGAAACTGGAGGTCCTTGTACTGGTAACTTGAAGATTTTAT
TTTTTCAGGTACCATGTTCCTCGGTCTTGGTTAAAACCCACTCAAAATCTGTTGGTGCTTTTTGAAGAACTTGGCGGAGA
TCCCACAAGAATTTCTCTCGTGAAAAGATCAGTCACTAACGTATGTTCGAATGTAGCTGAATATCATCCAAACATTAAGA
ACTGGCAAATTGAGAACTACGGCAAAACCGAAGAGTTTCACCTACCCAAAGTTCGCATTCACTGTGCTCCTGGTCAATCT
ATTTCCTCCATTAAATTTGCAAGCTTCGGAACTCCTCTCGGAACCTGTGGGAGCTTCAAGCAAGGAACTTGCCATGCTCC
CGACTCACACGCCGTTGTAGAAAAGGTACCCTCAGCGACAAAAATAAATTGTTTACTTTAGTTCAGCCACTCACTCGGCA
GCCTAATTTCACTTGACTCACATTTTGTTCTTGTAACTTTGCCAGAAATGTCTAGGACGCCAAACATGTGCTGTGACAAT
ATCAAATAGCAACTTTGGAGAAGATCCCTGCCCCAACGTACTGAAGCGGTTGTCTGTAGAAGCACATTGTACACCTACTC
AGAATTGAACAGTAAAAAAAAGAAAAGTTGTTCAGATGTTGCGTAACTTAGTGTACACCCATGAGGAAAAGGCTAGTGAG
GTAAGAATAAACTGTGAAGCAAAGGAAATAGGAGGTAGTAGTTTGGTTGGTGAATGTTGTCAAGGAAAACTCCTGATACA
CGTTCATTAGGTAGTACTCTAAATTTTGGGGGTGCCGAAGGGGACTCTGTGAAGATAGCATATTTATACACGAGTTTGTA
GATTGTTGGGAGTTCCAAAATGCCACTCCCATCTTAGAGTCTGGT
TGCACATTATAGTTTTGAGGTGGAGGAAGAGGCAATTACTTGGACACAAGCACTGTGGTTGATCTTCAAAGCAAAAGTGG
ACTGACTTGCTGTGCACCCACATTGCAATTAAGCCTACCCTCCATAAATTTTCACCTTTTTGTTCCAAGATTCTTGATCT
TGCTTCAAATTTCCCTCCACCCAGAAAGGAAAGTTGTGTTCTTGGATGTGTTTGTAAGATTAAAAAAAAAGAGAAAAAAA
GGGAGGTGGAATCATGGAGGTTAACTCACTTCAGAAGTGGGTTCTGCTATGGTGTATAGTATTGTTTATTAGCTCTGGGT
TGGTTCACTGTGATGTTACATATGATAGGAAAGCTATTGTGATTAATGGGCAAAGAAGATTACTTTTCTCTGGTTCTATA
CATTACCCTAGAAGTACCCCTGAGGTACTTCAATTCTTGCCCATTTATGCTCTCTTTTTTCTTTTTACTGTGAAAGTGTT
TATGAAGTGAGCTTTAAAATGTGGTTTTGTAGATGTGGGAAGATCTGATAAACAAGGCAAAAGAAGGGGGTTTGGATGTG
GTTGAGACCTATGTCTTTTGGAATGTTCATGAGCCTTCTCCTGGCAATGTACTTCATTCCTTTCTTATTTCTGTTCAAAT
TAGCTTGTCTTCATTCATGTTTTGTGCTCAAAGATTAAATCTTTTTTTTTGGGTGTTTTCAGTACAATTTTGAAGGAAGA
TATGACCTGGTGAGGTTTGTAAAAACGATTCAGAAAGCAGGGCTGTATGCTCATCTTCGAATTGGCCCTTACGTTTGTGC
AGAGTGGAATTTTGGGTACATTTCTTCTTTTTTTCTCTCTCTTCACTAGATCTATAAAACATGTTCATACCAAGAGGTAC
TAATTTTTACTGTTAAATTCCACAGAGGGTTTCCAGTATGGCTGAAGTATGTACCTGGCATTAGCTTCAGAGCTGATAAT
GAACCTTTCAAGGTTTCAGCCTTCTCCTGAAAATAATTGAAAAAAAAGAAATTCACCATTAGAAGATTATCATTTTAAAT
GGAGGATAGTTAATGAAATTTAATTGTTTTATGGATTGACAGAACGCAATGAAAGGGTATGCTGAGAAAATTGTTAACTT
GATGAAGAGTCATAATCTTTTCGAGTCTCAGGGTGGTCCAATCATACTCTCACAGGTTGTTTATCTTTCAGGATTTTTTA
TTCCAATTAGTTCATTATACTCTACAATTCTTGTGTTTGCTGAAGCCTAATTCCACTAAAACTAGTTCAATTCTCATGTA
ACCTTTCTGTCTGATCTGCTACTGCAGATTGAGAATGAGTATGGGCCTCAAGCCAAGGTACTTGGAGCACCGGGACATCA
GTATTCAACATGGGCTGCAAATATGGCAGTTGGATTAGACACAGGCGTCCCATGGGTGATGTGCAAGGAAGAAGATGCAC
CAGATCCTGTGGTAAGCAAACATAGTTGTTAGAGCTTCCCATACTCCATTTGGCTTTGTTTTGTAGCATGTTCTAGTTTA
GTTTAACTTACATACACCTGTCAATCTTGCTATAAAAGTTACCTGTAATTAGCTTTTAAATGACCTAATTTTACACTTAA
GTGCATATTAGTTAACCTCCTCCTAATGAGCCAAACAGTTCTGCTCTTATCGATCCTCTCCAATTTTGCTTCAGTTTCTA
ATAAAAATCCAAAAATTTTACAACTGATTAGCTCTCTACAACTTCTTAAACAACTTTTTCTTATTGCTGATAACAGATCA
ACACATGCAATGGTTTCTACTGTGATAATTTCTTCCCAAACAAACCATACAAACCTGCAATTTGGACTGAAGCTTGGAGT
GGATGGTAAATCTTGTCTCTTCCTTTAAACTTTTGATTATATTTGAAGTTGGGTCATTTTTGACTTGTTTTCTCAATAAA
TTTAAGGTTCTCGGAATTTGGCGGTCCCCTTCATCAGAGACCAGTTCAGGATTTGGCATTTGCTGTTGCCCAATTTATAC
AAAGAGGAGGATCTTTTGTTAACTATTACATGGTTAGTTCCATTTCACTACTTCGGCTAATGCCTGATGTGGAGAAGTCA
TACTTCTTCTTTATAAATCGAAAGCATGCTTGAAGTCCCATATAGTAACAACATTTCCTCTCTTTGCCTAACAGTACCAT
GGGGGCACGAACTTTGGACGCACTGCGGGTGGGCCATTCATCACTACCAGCTATGATTATGATGCTCCAATTGATGAGTA
TGGTGAGTGTAGAGCTGTTGTTTCCTCTTTACTTCTCTTCTCTTGTAGATTTAAACTCACATGCCTTGAGTATTATTTAA
GGAGTTGTGATGGTCTTCGAAATTGTGGATTGTTTCAGTGAGACCATGTTTCCTTCACTGATATTTGTTCTATAAGGATT
TCCTTCTCTAATTTGTGTACGCTTTAAAAGCTTTGTAGCATAAAAATTTGCCTGTCATTATTCAATTCCGCTTAACTGTA
AGGAGTCCTTTAAACTCCCTTCCATTCAACAGGTTTGATCAGACAGCCAAAATATGGTCATCTCAAGGAGCTTCATAGAG
CTGTCAAGATGTGTGAGAAATCCATAGTTTCTGCAGATCCAGCAATCACATCCTTGGGAAACCTTCAACAAGTACATAAT
TCTGCATAAACATCTGTAATCTTGTAACTATGGTTCATTGTAATTTGTCTCTCATTGAATATTCTCTGTTGCTGTAGGCA
TATGTGTACTCTTCAGAGACAGGGGGTTGTGCAGCTTTCTTGTCAAACAATGACTGGAAATCTGCTGCTAGAGTAATGTT
CAATAATATGCACTATAATTTGCCTCCTTGGTCCATTAGCATCCTTCCTGATTGCAGAAATGTAGTCTTCAACACGGCCA
AAGTACGTAATACACCCGTGTGGGAACTTCTGTACATTCAATAGTACTCATGAGCTGCTTTAGCATCCTCCGAAAGATAT
AGTTCATTTATGCTACTCGCTGACAACTCTGAAAGCAAGGATTTAACAGCTTTTAAATTCATATGTAGGTTGGAGTTCAA
ACATCAAAGATGGAAATGCTACCGACTAACTCAGAGATGCTATCTTGGGAGACTTACAGTGAAGATATATCTGCATTAGA
TGACAGCTCATCAATTAGGTCTTTTGGTCTCTTGGAGCAAATAAATGTAACCAGAGATACAAGTGATTATTTGTGGTACA
TAACTAGGTGAGTTTGGTTTTGTATCTGACTATTAAACCTGTTTCCTCGATTTGCCTCTCATGGGGAATTGGATTGTCTG
CCAGTGCAAATGTTTTATTGCTCATCTCTTTTTACTGCACGACGTGTCTGAAGAGAAGGGGAGAATGGGAAGGGGGTTAC
AGGTGGAGGGTGGATTGTCTTGAAGTACCTCCTTTACAGAGAATAATGTGTTTTAATCTTCTAGGAAATTAAGTAAATGT
TCCACTCGCTCGAGGAGTATTTCTAGATGAATTGACACTTTCGGTTCTCATATTACTCATCCTTGCGACCTCTCCTACTT
CTTTGAACGCTTGTGACCTGAAAGCTGAAATTTTAGCTTTATGTGACATGTATGATGTTTTCCTCTGTTACAGTGTTGAT
ATTGGTTCAACTGAGTCCTTCTTGCATGGTGGAGAGCTCCCTACTCTTATAGTTGAGACAACAGGCCATGCTATGCATGT
GTTTATTAATGGTCAGCTCTCAGGTAATGCAGTCAATGTTACTTCATCAAAAGTATCTATGATTATGCTTAAACTTGCTA
ATTTCAATGAATGCTCCTACACATTTTAAAGGTTCTGCATTTGGGACAAGGAAGAATAGGAGATTTGTATTTAAAGGAAA
AGTCAATCTTCGTGCTGGCTCAAACAGAATTGCACTGCTTAGCGTGGCTGTCGGGCTGCCGGTTAGTTAATCCTCACCTT
CGGTCTTCCAAATAGCATGCATACCTGAGGTCAATTCAAGTTTGAGTAACTCATGAAGAAAATAAAATAAGTTTCTACGG
TTAAATAGCTTCAAATAAAGTCAACAATAAGTGTTGAGCATCACTAACATATATCAGAATCATTAATCAGCTGCAGTATC
ACTGATTACTATGCTAGCGCAAAAAACAAAATGCTGGTACCAGCAAGTGAAGAAAAGAAATAATTATTAGAGGTTACAAT
GTTGCATAGCTTAAAACTATTGAGCATGGGTTAATGGCTACTTTCGGCAGAGTTAATGATAATTTGTAGACAACGTTTTT
CCTTATTACCGCTGGGATTGGCAAAAGCATGAAACTTAAGCGCACAAGAAAATACAGCCTCACGTTGCTTACCTTGCAGT
GTAAGAAGGCCATTGTGCATTCTTTGATTGCTATATACCCGTGTGAGAGGAAGGTAATGTAAATTCTCCTTTCCCAGCAG
TAAAGGGATAGGAAAAAGTCTTATCAAAAAAGAAGGGATAGAAAACCAGTTCATCAGTGCAACTAGCTATTATCATCATG
ATCACTGATATGTTGAAGCAACACTTTGTAGCCTATTTACTGTCGTGAGATCATTTATACATTCTTTTTTAATGTACTCT
TGATTCTTAATATTTCTTTTTGTTTTCTGAAGAACATTGGTGGACATTTTGAAACATGGAGCACTGGCGTACTAGGTCCT
GTTGCAATTCAAGGACTTGACCATGGAAAATGGGACTTGTCCTGGGCAAAGTGGACATATCAGGTGCACTAACTTATAGC
CCTATTGTTCAATCAATCATCAATTACTTCAACTGCAACCTTTAACTGATATGGACTTACTAACAGGTTGGGCTTAAAGG
GGAGGCCATGAATCTTGTTTCGACAAATGGTATTTCTGCCGTTGACTGGATGCAAGGTTCATTAATTGCACAGAAACAAC
AACCCTTGACATGGCATAAGGTATGAAACTAGGAGTTAGGTTCCAAAGATGCAATTGATGGTAGTCATGTCTTACAACTC
ATCATATTGCAGGCTTACTTCAATACACCCGAAGGAGATGAGCCATTGGCTTTGGACATGAGCAGTATGGGTAAAGGTCA
AGTATGGATTAATGGCCAGAGTATTGGTAGATATTGGACTGCATATGCTACTGGAGATTGCAATGGGTGCCAATATTCTG
GAGTTTTTCGGCCTCCAAAATGTCAACTGGGATGTGGGGAACCAACTCAAAAATGGTAAGCCACTTCTTCCCAGCTATAC
ACTGCTTCCTGACAATTTGACAGAACACCATAAATAACTGGAAACTGGAGGTCCTTGTACTGGTAACTTGAAGATTTTAT
TTTTTCAGGTACCATGTTCCTCGGTCTTGGTTAAAACCCACTCAAAATCTGTTGGTGCTTTTTGAAGAACTTGGCGGAGA
TCCCACAAGAATTTCTCTCGTGAAAAGATCAGTCACTAACGTATGTTCGAATGTAGCTGAATATCATCCAAACATTAAGA
ACTGGCAAATTGAGAACTACGGCAAAACCGAAGAGTTTCACCTACCCAAAGTTCGCATTCACTGTGCTCCTGGTCAATCT
ATTTCCTCCATTAAATTTGCAAGCTTCGGAACTCCTCTCGGAACCTGTGGGAGCTTCAAGCAAGGAACTTGCCATGCTCC
CGACTCACACGCCGTTGTAGAAAAGGTACCCTCAGCGACAAAAATAAATTGTTTACTTTAGTTCAGCCACTCACTCGGCA
GCCTAATTTCACTTGACTCACATTTTGTTCTTGTAACTTTGCCAGAAATGTCTAGGACGCCAAACATGTGCTGTGACAAT
ATCAAATAGCAACTTTGGAGAAGATCCCTGCCCCAACGTACTGAAGCGGTTGTCTGTAGAAGCACATTGTACACCTACTC
AGAATTGAACAGTAAAAAAAAGAAAAGTTGTTCAGATGTTGCGTAACTTAGTGTACACCCATGAGGAAAAGGCTAGTGAG
GTAAGAATAAACTGTGAAGCAAAGGAAATAGGAGGTAGTAGTTTGGTTGGTGAATGTTGTCAAGGAAAACTCCTGATACA
CGTTCATTAGGTAGTACTCTAAATTTTGGGGGTGCCGAAGGGGACTCTGTGAAGATAGCATATTTATACACGAGTTTGTA
GATTGTTGGGAGTTCCAAAATGCCACTCCCATCTTAGAGTCTGGT
Download sequence region |
Get flanking sequences on SL2.50ch02
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc02g084720.2.1 Beta-galactosidase (AHRD V1 ***- Q9LLS9_SOLLC); contains Interpro domain(s) IPR019801 Glycoside hydrolase, family 35, conserved site IPR001944 Glycoside hydrolase, family 35 IPR000922 D-galactoside/L-rhamnose binding SUEL lectin
TGCACATTATAGTTTTGAGGTGGAGGAAGAGGCAATTACTTGGACACAAGCACTGTGGTTGATCTTCAAAGCAAAAGTGG
ACTGACTTGCTGTGCACCCACATTGCAATTAAGCCTACCCTCCATAAATTTTCACCTTTTTGTTCCAAGATTCTTGATCT
TGCTTCAAATTTCCCTCCACCCAGAAAGGAAAGTTGTGTTCTTGGATGTGTTTGTAAGATTAAAAAAAAAGAGAAAAAAA
GGGAGGTGGAATCATGGAGGTTAACTCACTTCAGAAGTGGGTTCTGCTATGGTGTATAGTATTGTTTATTAGCTCTGGGT
TGGTTCACTGTGATGTTACATATGATAGGAAAGCTATTGTGATTAATGGGCAAAGAAGATTACTTTTCTCTGGTTCTATA
CATTACCCTAGAAGTACCCCTGAGATGTGGGAAGATCTGATAAACAAGGCAAAAGAAGGGGGTTTGGATGTGGTTGAGAC
CTATGTCTTTTGGAATGTTCATGAGCCTTCTCCTGGCAATTACAATTTTGAAGGAAGATATGACCTGGTGAGGTTTGTAA
AAACGATTCAGAAAGCAGGGCTGTATGCTCATCTTCGAATTGGCCCTTACGTTTGTGCAGAGTGGAATTTTGGAGGGTTT
CCAGTATGGCTGAAGTATGTACCTGGCATTAGCTTCAGAGCTGATAATGAACCTTTCAAGAACGCAATGAAAGGGTATGC
TGAGAAAATTGTTAACTTGATGAAGAGTCATAATCTTTTCGAGTCTCAGGGTGGTCCAATCATACTCTCACAGATTGAGA
ATGAGTATGGGCCTCAAGCCAAGGTACTTGGAGCACCGGGACATCAGTATTCAACATGGGCTGCAAATATGGCAGTTGGA
TTAGACACAGGCGTCCCATGGGTGATGTGCAAGGAAGAAGATGCACCAGATCCTGTGATCAACACATGCAATGGTTTCTA
CTGTGATAATTTCTTCCCAAACAAACCATACAAACCTGCAATTTGGACTGAAGCTTGGAGTGGATGGTTCTCGGAATTTG
GCGGTCCCCTTCATCAGAGACCAGTTCAGGATTTGGCATTTGCTGTTGCCCAATTTATACAAAGAGGAGGATCTTTTGTT
AACTATTACATGTACCATGGGGGCACGAACTTTGGACGCACTGCGGGTGGGCCATTCATCACTACCAGCTATGATTATGA
TGCTCCAATTGATGAGTATGGTTTGATCAGACAGCCAAAATATGGTCATCTCAAGGAGCTTCATAGAGCTGTCAAGATGT
GTGAGAAATCCATAGTTTCTGCAGATCCAGCAATCACATCCTTGGGAAACCTTCAACAAGCATATGTGTACTCTTCAGAG
ACAGGGGGTTGTGCAGCTTTCTTGTCAAACAATGACTGGAAATCTGCTGCTAGAGTAATGTTCAATAATATGCACTATAA
TTTGCCTCCTTGGTCCATTAGCATCCTTCCTGATTGCAGAAATGTAGTCTTCAACACGGCCAAAGTTGGAGTTCAAACAT
CAAAGATGGAAATGCTACCGACTAACTCAGAGATGCTATCTTGGGAGACTTACAGTGAAGATATATCTGCATTAGATGAC
AGCTCATCAATTAGGTCTTTTGGTCTCTTGGAGCAAATAAATGTAACCAGAGATACAAGTGATTATTTGTGGTACATAAC
TAGTGTTGATATTGGTTCAACTGAGTCCTTCTTGCATGGTGGAGAGCTCCCTACTCTTATAGTTGAGACAACAGGCCATG
CTATGCATGTGTTTATTAATGGTCAGCTCTCAGGTTCTGCATTTGGGACAAGGAAGAATAGGAGATTTGTATTTAAAGGA
AAAGTCAATCTTCGTGCTGGCTCAAACAGAATTGCACTGCTTAGCGTGGCTGTCGGGCTGCCGAACATTGGTGGACATTT
TGAAACATGGAGCACTGGCGTACTAGGTCCTGTTGCAATTCAAGGACTTGACCATGGAAAATGGGACTTGTCCTGGGCAA
AGTGGACATATCAGGTTGGGCTTAAAGGGGAGGCCATGAATCTTGTTTCGACAAATGGTATTTCTGCCGTTGACTGGATG
CAAGGTTCATTAATTGCACAGAAACAACAACCCTTGACATGGCATAAGGCTTACTTCAATACACCCGAAGGAGATGAGCC
ATTGGCTTTGGACATGAGCAGTATGGGTAAAGGTCAAGTATGGATTAATGGCCAGAGTATTGGTAGATATTGGACTGCAT
ATGCTACTGGAGATTGCAATGGGTGCCAATATTCTGGAGTTTTTCGGCCTCCAAAATGTCAACTGGGATGTGGGGAACCA
ACTCAAAAATGGTACCATGTTCCTCGGTCTTGGTTAAAACCCACTCAAAATCTGTTGGTGCTTTTTGAAGAACTTGGCGG
AGATCCCACAAGAATTTCTCTCGTGAAAAGATCAGTCACTAACGTATGTTCGAATGTAGCTGAATATCATCCAAACATTA
AGAACTGGCAAATTGAGAACTACGGCAAAACCGAAGAGTTTCACCTACCCAAAGTTCGCATTCACTGTGCTCCTGGTCAA
TCTATTTCCTCCATTAAATTTGCAAGCTTCGGAACTCCTCTCGGAACCTGTGGGAGCTTCAAGCAAGGAACTTGCCATGC
TCCCGACTCACACGCCGTTGTAGAAAAGAAATGTCTAGGACGCCAAACATGTGCTGTGACAATATCAAATAGCAACTTTG
GAGAAGATCCCTGCCCCAACGTACTGAAGCGGTTGTCTGTAGAAGCACATTGTACACCTACTCAGAATTGAACAGTAAAA
AAAAGAAAAGTTGTTCAGATGTTGCGTAACTTAGTGTACACCCATGAGGAAAAGGCTAGTGAGGTAAGAATAAACTGTGA
AGCAAAGGAAATAGGAGGTAGTAGTTTGGTTGGTGAATGTTGTCAAGGAAAACTCCTGATACACGTTCATTAGGTAGTAC
TCTAAATTTTGGGGGTGCCGAAGGGGACTCTGTGAAGATAGCATATTTATACACGAGTTTGTAGATTGTTGGGAGTTCCA
AAATGCCACTCCCATCTTAGAGTCTGGT
TGCACATTATAGTTTTGAGGTGGAGGAAGAGGCAATTACTTGGACACAAGCACTGTGGTTGATCTTCAAAGCAAAAGTGG
ACTGACTTGCTGTGCACCCACATTGCAATTAAGCCTACCCTCCATAAATTTTCACCTTTTTGTTCCAAGATTCTTGATCT
TGCTTCAAATTTCCCTCCACCCAGAAAGGAAAGTTGTGTTCTTGGATGTGTTTGTAAGATTAAAAAAAAAGAGAAAAAAA
GGGAGGTGGAATCATGGAGGTTAACTCACTTCAGAAGTGGGTTCTGCTATGGTGTATAGTATTGTTTATTAGCTCTGGGT
TGGTTCACTGTGATGTTACATATGATAGGAAAGCTATTGTGATTAATGGGCAAAGAAGATTACTTTTCTCTGGTTCTATA
CATTACCCTAGAAGTACCCCTGAGATGTGGGAAGATCTGATAAACAAGGCAAAAGAAGGGGGTTTGGATGTGGTTGAGAC
CTATGTCTTTTGGAATGTTCATGAGCCTTCTCCTGGCAATTACAATTTTGAAGGAAGATATGACCTGGTGAGGTTTGTAA
AAACGATTCAGAAAGCAGGGCTGTATGCTCATCTTCGAATTGGCCCTTACGTTTGTGCAGAGTGGAATTTTGGAGGGTTT
CCAGTATGGCTGAAGTATGTACCTGGCATTAGCTTCAGAGCTGATAATGAACCTTTCAAGAACGCAATGAAAGGGTATGC
TGAGAAAATTGTTAACTTGATGAAGAGTCATAATCTTTTCGAGTCTCAGGGTGGTCCAATCATACTCTCACAGATTGAGA
ATGAGTATGGGCCTCAAGCCAAGGTACTTGGAGCACCGGGACATCAGTATTCAACATGGGCTGCAAATATGGCAGTTGGA
TTAGACACAGGCGTCCCATGGGTGATGTGCAAGGAAGAAGATGCACCAGATCCTGTGATCAACACATGCAATGGTTTCTA
CTGTGATAATTTCTTCCCAAACAAACCATACAAACCTGCAATTTGGACTGAAGCTTGGAGTGGATGGTTCTCGGAATTTG
GCGGTCCCCTTCATCAGAGACCAGTTCAGGATTTGGCATTTGCTGTTGCCCAATTTATACAAAGAGGAGGATCTTTTGTT
AACTATTACATGTACCATGGGGGCACGAACTTTGGACGCACTGCGGGTGGGCCATTCATCACTACCAGCTATGATTATGA
TGCTCCAATTGATGAGTATGGTTTGATCAGACAGCCAAAATATGGTCATCTCAAGGAGCTTCATAGAGCTGTCAAGATGT
GTGAGAAATCCATAGTTTCTGCAGATCCAGCAATCACATCCTTGGGAAACCTTCAACAAGCATATGTGTACTCTTCAGAG
ACAGGGGGTTGTGCAGCTTTCTTGTCAAACAATGACTGGAAATCTGCTGCTAGAGTAATGTTCAATAATATGCACTATAA
TTTGCCTCCTTGGTCCATTAGCATCCTTCCTGATTGCAGAAATGTAGTCTTCAACACGGCCAAAGTTGGAGTTCAAACAT
CAAAGATGGAAATGCTACCGACTAACTCAGAGATGCTATCTTGGGAGACTTACAGTGAAGATATATCTGCATTAGATGAC
AGCTCATCAATTAGGTCTTTTGGTCTCTTGGAGCAAATAAATGTAACCAGAGATACAAGTGATTATTTGTGGTACATAAC
TAGTGTTGATATTGGTTCAACTGAGTCCTTCTTGCATGGTGGAGAGCTCCCTACTCTTATAGTTGAGACAACAGGCCATG
CTATGCATGTGTTTATTAATGGTCAGCTCTCAGGTTCTGCATTTGGGACAAGGAAGAATAGGAGATTTGTATTTAAAGGA
AAAGTCAATCTTCGTGCTGGCTCAAACAGAATTGCACTGCTTAGCGTGGCTGTCGGGCTGCCGAACATTGGTGGACATTT
TGAAACATGGAGCACTGGCGTACTAGGTCCTGTTGCAATTCAAGGACTTGACCATGGAAAATGGGACTTGTCCTGGGCAA
AGTGGACATATCAGGTTGGGCTTAAAGGGGAGGCCATGAATCTTGTTTCGACAAATGGTATTTCTGCCGTTGACTGGATG
CAAGGTTCATTAATTGCACAGAAACAACAACCCTTGACATGGCATAAGGCTTACTTCAATACACCCGAAGGAGATGAGCC
ATTGGCTTTGGACATGAGCAGTATGGGTAAAGGTCAAGTATGGATTAATGGCCAGAGTATTGGTAGATATTGGACTGCAT
ATGCTACTGGAGATTGCAATGGGTGCCAATATTCTGGAGTTTTTCGGCCTCCAAAATGTCAACTGGGATGTGGGGAACCA
ACTCAAAAATGGTACCATGTTCCTCGGTCTTGGTTAAAACCCACTCAAAATCTGTTGGTGCTTTTTGAAGAACTTGGCGG
AGATCCCACAAGAATTTCTCTCGTGAAAAGATCAGTCACTAACGTATGTTCGAATGTAGCTGAATATCATCCAAACATTA
AGAACTGGCAAATTGAGAACTACGGCAAAACCGAAGAGTTTCACCTACCCAAAGTTCGCATTCACTGTGCTCCTGGTCAA
TCTATTTCCTCCATTAAATTTGCAAGCTTCGGAACTCCTCTCGGAACCTGTGGGAGCTTCAAGCAAGGAACTTGCCATGC
TCCCGACTCACACGCCGTTGTAGAAAAGAAATGTCTAGGACGCCAAACATGTGCTGTGACAATATCAAATAGCAACTTTG
GAGAAGATCCCTGCCCCAACGTACTGAAGCGGTTGTCTGTAGAAGCACATTGTACACCTACTCAGAATTGAACAGTAAAA
AAAAGAAAAGTTGTTCAGATGTTGCGTAACTTAGTGTACACCCATGAGGAAAAGGCTAGTGAGGTAAGAATAAACTGTGA
AGCAAAGGAAATAGGAGGTAGTAGTTTGGTTGGTGAATGTTGTCAAGGAAAACTCCTGATACACGTTCATTAGGTAGTAC
TCTAAATTTTGGGGGTGCCGAAGGGGACTCTGTGAAGATAGCATATTTATACACGAGTTTGTAGATTGTTGGGAGTTCCA
AAATGCCACTCCCATCTTAGAGTCTGGT
![]() ![]() | translated polypeptide sequence |
>Solyc02g084720.2.1 Beta-galactosidase (AHRD V1 ***- Q9LLS9_SOLLC); contains Interpro domain(s) IPR019801 Glycoside hydrolase, family 35, conserved site IPR001944 Glycoside hydrolase, family 35 IPR000922 D-galactoside/L-rhamnose binding SUEL lectin
MEVNSLQKWVLLWCIVLFISSGLVHCDVTYDRKAIVINGQRRLLFSGSIHYPRSTPEMWEDLINKAKEGGLDVVETYVFW
NVHEPSPGNYNFEGRYDLVRFVKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRADNEPFKNAMKGYAEKIV
NLMKSHNLFESQGGPIILSQIENEYGPQAKVLGAPGHQYSTWAANMAVGLDTGVPWVMCKEEDAPDPVINTCNGFYCDNF
FPNKPYKPAIWTEAWSGWFSEFGGPLHQRPVQDLAFAVAQFIQRGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPID
EYGLIRQPKYGHLKELHRAVKMCEKSIVSADPAITSLGNLQQAYVYSSETGGCAAFLSNNDWKSAARVMFNNMHYNLPPW
SISILPDCRNVVFNTAKVGVQTSKMEMLPTNSEMLSWETYSEDISALDDSSSIRSFGLLEQINVTRDTSDYLWYITSVDI
GSTESFLHGGELPTLIVETTGHAMHVFINGQLSGSAFGTRKNRRFVFKGKVNLRAGSNRIALLSVAVGLPNIGGHFETWS
TGVLGPVAIQGLDHGKWDLSWAKWTYQVGLKGEAMNLVSTNGISAVDWMQGSLIAQKQQPLTWHKAYFNTPEGDEPLALD
MSSMGKGQVWINGQSIGRYWTAYATGDCNGCQYSGVFRPPKCQLGCGEPTQKWYHVPRSWLKPTQNLLVLFEELGGDPTR
ISLVKRSVTNVCSNVAEYHPNIKNWQIENYGKTEEFHLPKVRIHCAPGQSISSIKFASFGTPLGTCGSFKQGTCHAPDSH
AVVEKKCLGRQTCAVTISNSNFGEDPCPNVLKRLSVEAHCTPTQN*
MEVNSLQKWVLLWCIVLFISSGLVHCDVTYDRKAIVINGQRRLLFSGSIHYPRSTPEMWEDLINKAKEGGLDVVETYVFW
NVHEPSPGNYNFEGRYDLVRFVKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRADNEPFKNAMKGYAEKIV
NLMKSHNLFESQGGPIILSQIENEYGPQAKVLGAPGHQYSTWAANMAVGLDTGVPWVMCKEEDAPDPVINTCNGFYCDNF
FPNKPYKPAIWTEAWSGWFSEFGGPLHQRPVQDLAFAVAQFIQRGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPID
EYGLIRQPKYGHLKELHRAVKMCEKSIVSADPAITSLGNLQQAYVYSSETGGCAAFLSNNDWKSAARVMFNNMHYNLPPW
SISILPDCRNVVFNTAKVGVQTSKMEMLPTNSEMLSWETYSEDISALDDSSSIRSFGLLEQINVTRDTSDYLWYITSVDI
GSTESFLHGGELPTLIVETTGHAMHVFINGQLSGSAFGTRKNRRFVFKGKVNLRAGSNRIALLSVAVGLPNIGGHFETWS
TGVLGPVAIQGLDHGKWDLSWAKWTYQVGLKGEAMNLVSTNGISAVDWMQGSLIAQKQQPLTWHKAYFNTPEGDEPLALD
MSSMGKGQVWINGQSIGRYWTAYATGDCNGCQYSGVFRPPKCQLGCGEPTQKWYHVPRSWLKPTQNLLVLFEELGGDPTR
ISLVKRSVTNVCSNVAEYHPNIKNWQIENYGKTEEFHLPKVRIHCAPGQSISSIKFASFGTPLGTCGSFKQGTCHAPDSH
AVVEKKCLGRQTCAVTISNSNFGEDPCPNVLKRLSVEAHCTPTQN*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
![]() ![]() | [Associate new genbank sequence] |
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
A family of at least seven beta-galactosidase genes is expressed during tomato fruit development.
Plant physiology (2000)
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During our search for a cDNA encoding beta-galactosidase II, a beta-galactosidase/exogalactanase (EC 3.2.1.23) present during tomato (Lycopersicon esculentum Mill.) fruit ripening, a family of seven tomato beta-galactosidase (TBG) cDNAs was identified. The shared amino acid sequence identity among the seven TBG clones ranged from 33% to 79%. All contained the putative active site-containing consensus sequence pattern G-G-P-[LIVM]-x-Q-x-E-N-E-[FY] belonging to glycosyl hydrolase family 35. Six of the seven single-copy genes were mapped using restriction fragment length polymorphisms of recombinant inbred lines. RNA gel-blot analysis was used to evaluate TBG mRNA levels throughout fruit development, in different fruit tissues, and in various plant tissues. RNA gel-blot analysis was also used to reveal TBG mRNA levels in fruit of the rin, nor, and Nr tomato mutants. The TBG4-encoded protein, known to correspond to beta-galactosidase II, was expressed in yeast and exo-galactanase activity was confirmed via a quantified release of galactosyl residues from cell wall fractions containing beta(1-->4)-D-galactan purified from tomato fruit.
Smith, DL. Gross, KC.
Plant physiology.
2000.
123(3).
1173-83.
Down-regulation of a ripening-related beta-galactosidase gene (TBG1) in transgenic tomato fruits.
Journal of experimental botany (2001)
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Exo-galactanase/beta-galactosidase (EC 3.2.1.23) activity is thought to be responsible for the loss of galactosyl residues from the cell walls of ripening tomatoes. Transgenic tomato plants (Lycopersicon esculentum Mill cv. Ailsa Craig) with reduced exo-galactanase/beta-galactosidase mRNA were generated to test this hypothesis and to investigate the role of the enzyme in fruit softening. A previously identified tomato beta-galactosidase cDNA clone, TBG1, was used in the experiments. Heterologous expression of the clone in yeast demonstrated that TBG1 could release galactosyl residues from tomato cell wall galactans. Transgenic plants showed a reduction in TBG1 mRNA to 10% of normal levels in the ripening fruits. However, despite the reduction in message, total beta-galactosidase and exo-galactanase activities were unaffected. Furthermore, there was no apparent effect on levels of cell wall galactosyl residues when compared with the control. It was concluded that during the ripening of tomato fruits a family of beta-galactosidases capable of degrading cell wall galactans are active and down-regulation of TBG1 message to 10% was insufficient to alter the degree of galactan degradation.
Carey, AT. Smith, DL. Harrison, E. Bird, CR. Gross, KC. Seymour, GB. Tucker, GA.
Journal of experimental botany.
2001.
52(357).
663-8.
Down-regulation of tomato beta-galactosidase 4 results in decreased fruit softening.
Plant physiology (2002)
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Transcript abundance of the gene encoding beta-galactosidase II, a beta-galactosidase/exo-galactanase (EC 3.2.1.23) present during tomato (Lycopersicon esculentum) fruit ripening, was suppressed by expression of an antisense tomato beta-galactosidase 4 (TBG4) cDNA driven by the cauliflower mosaic virus 35S promoter. RNA gel-blot analysis was used to evaluate TBG4 mRNA levels in transgenic fruit. All of the antisense lines had attenuated TBG4 mRNA levels in turning stage fruit; however, TBG4 mRNA suppression was unstable, and mRNA levels varied in red-ripe fruit among the lines. Suppression of TBG4 mRNA levels in antisense fruit was correlated with a reduction in extractable exo-galactanase activity against a lupin galactan. All of the antisense lines had reduced free galactose levels at mature green stage 4, but levels comparable with controls during ripening. Total cell wall galactosyl contents in the antisense fruit were not significantly different from control fruit. Whole-fruit firmness was measured using a texture analyzer and the means of the peak force measurements for four of six antisense lines were significantly higher than control fruit. One antisense line had red-ripe fruit that were 40% firmer than controls. Fruit from this antisense line also had the lowest TBG4 mRNA and exo-galactanase levels and the highest wall galactosyl content during the early stages of ripening, implicating an involvement of this gene product in cell wall modification leading to fruit softening.
Smith, DL. Abbott, JA. Gross, KC.
Plant physiology.
2002.
129(4).
1755-62.
Antisense suppression of a beta-galactosidase gene (TB G6) in tomato increases fruit cracking.
Journal of experimental botany (2003)
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Antisense suppression of a tomato beta-galactosidase gene (TBG6) was used to study its role in fruit development, cell wall-modification, and fruit firmness. TBG6 mRNA is highly abundant during the early stages of fruit development, but the levels decline sharply after the breaker stage with the start of the respiratory climacteric and a concomitant increase in ethylene production. Two antisense lines were obtained with significantly reduced levels of TBG6 mRNA at all stages of fruit development. At 30 d after pollination (dap), TBG6 mRNA levels were reduced by up to 98% and 88% in lines 6-2 and 6-10, respectively. Morphological phenotypes observed in the antisense lines included increased fruit cracking, reduced locular space, and a doubling in the thickness of the fruit cuticle. Two biochemical changes in antisense lines, compared with wild-type lines, were a reduction of exo-galactanase activity at the breaker +3 d stage and a reduction in the cell wall galactosyl content at the 20 dap stage. In addition, transgenic lines exhibited a 35-39% reduction in fruit firmness at the 20 dap stage, but their texture was equivalent to the wild type at 30 dap and beyond. Although the exact function of the TBG6 product is still unknown, these results implicate an important role for this enzyme in early fruit growth and development in tomato.
Moctezuma, E. Smith, DL. Gross, KC.
Journal of experimental botany.
2003.
54(390).
2025-33.
beta-Galactosidases in Ripening Tomatoes.
Plant physiology (1983)
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Tomatoes (Lycopersicon esculentum L.) contained a high level of beta-galactosidase activity which was due to three forms of the enzyme. During tomato ripening, the sum of their activities remained relatively constant, but the levels of the individual forms of beta-galactosidase changed markedly. The three enzymes were separated by a combination of chromatography of DEAE-Sephadex A-50 and Sephadex G-100. During ripening of tomatoes, beta-galactosidases I and III levels decreased but the beta-galactosidase II level increased more than 3-fold. The three enzymes were optimally active near pH 4, and all were inhibited by galactose and galactonolactone. However, the enzymes differed in molecular weight, K(m) value with p-nitrophenyl-beta-galactoside, and stability with respect to pH and temperature. beta-Galactosidase II was the only enzyme capable of hydrolyzing a polysaccharide that was isolated from tomatoes and that consisted primarily of beta-1, 4-linked galactose. The ability of beta-galactosidase II to degrade the galactan and the increase in its activity during tomato ripening suggest a possible role for this enzyme in tomato softening.
Pressey, R.
Plant physiology.
1983.
71(1).
132-135.
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biological_process
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cellular_component
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molecular_function
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