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Tomato locus polymerase 4 largest subunit RPD1
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
New Edit Delete
|
Locus | Solyc08g080210 |
Locus name | polymerase 4 largest subunit RPD1 |
Symbol | rpd1 |
Gene activity | |
Description | |
Chromosome | 8 |
Arm |
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Links to external databases | None |
Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
Accession name:
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Alleles (0) | None | [Add new Allele] |
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Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc08g080210.2 SL2.50ch08:63542083..63534882 (sequence from reverse strand)
AGATGTAAAGCCTTTTTAATAATGTCCAAGCTTTTAGATGGAACAGTGAACTAGCTTATCTCTGTGTTTTCACTAGGGAA
TTGTGTTTTTGCTGTCTTTGCTTCTGTTCTTTGGTGCATCTGATTAACTTTCTGGCCTTCAGGTATACAGCATTCTGAAA
GATATTGATCCAGGGTTTCTTGAAGGACTTCTCAGAAGGAAGAATTCAATCTTCCTTAAAAGCTGCCTTTTGACTCCTAA
TAGTCATCGTGTCACAGAATTTGGGCAGCACATGATATTTGTAAGTGAGAAAATGTGTCTTTTCTTTTCTGGTAGCATTG
ATACCCATTTTTGGCACTCAGCTTTCTAATACGTGGTCACGTGCTGGTTTTAATGTCCCAGGATGAAAGCAATAGGCTTT
ACAGAAAGTTGATTGACTTTAGAGGGACAGCAAATGACTTGAGCATGTGCGTTTTAGATAGAATTAAAGTTTCAAAGGTA
AGAAATGCAACCACGTTTCTCCTTTCCCTTTCTTTGTCAGTTTTTTGTAGAACTACATTACATTTGAATTGAGCCTTTAC
GATTGCAGATACGTGCAGATAGATCGGTAATCAATGATCCTAATGCCCCTGCTACTGGTTTGAAGTATGTGAAAGAATTG
GTTCTAGCAAAACGCACTAATCATGCTTTCCGCATGGTTGTGGTTGGTGATCCTAACATAGAGCTAGGTGAAATTGGTAT
TCCATGTCATGTTGCAGAGAATCTCCACATGGCAGAAACTCTCAGTTTACGGAATTGGGAAAGGATGACTGATCTCTGTG
ATCTTATGATTCTTCAGAGGGGAGGGATTCTTGTCCGTAGAAATGGTGTCTTAGTTCGTATTAGTGTAATGGACGGGTTG
CAGAAAGGGGATATTATACATAGACCCCTTGTCGATGGAGATGTTGTGATGATAAATCGACCTCCGTCTATTCATCAACA
CTCGCTAATTGCTCTGTCTGTTAGGATTCTTCCTATAAATTCTGTTCTTTCAATCAATCCCCTTGTCTGTTCTCCATTCC
GTGGGGATTTTGATGGTGATTGCCTTCATGGTTATATTCCCCAATCAATTGATTCTACGATTGAGCTTAGTGAGCTTGTT
GCTCTGAAACAACAGTTGCTTGACGGACAGAATGGTCAAAATCTTCTTTCATTAAGTCATGATAGCTTGACTGCTGCTCA
TTTAATTTTGGAACCTGGAGTTTTCTTGGACCGTTTCCAGATGCAGCAGTTACAAATGTTTTGTCCACGTCAATTGGGAA
TGACTGCTATCGTAAAAGCACCACCAGGAAACATCTGTTATTGGACTGGCAAACAGTTATTCAGCTTGCTTTTGCCATCA
GACCTTGAATATGTTTTTCCATCAAATGGTGTCTGTATTAGTGAGGGGGAAATTGTGACTTCTTCTGGCGGGTCTTCTTG
GCTGCGTGATGCCAGTGATAATCTTTTTTATAGTCTTGTTAAACACAATGGAGGTGATACTCTTGACCTCCTTTATGCTG
CACAAACAGTTCTTTGTGAGTGGTTGTCAATGAGAGGCCTTAGTGTTTCATTGTCCGATCTTTACATATCTGCTGATTCA
TATTCCCGCGAAAATATGATTGATGAAGTCTGTTCTGGTTTGCAAGAGGCAGAACGGCTGTCTTACATCCAGCTGCTGAT
GATAAAGTATAATAAGGATTTCCTTTCTGGGAACTTAGAAGAAAGCAAGAACTCCATGGGTTTTGATTTTGAGTTTATGT
CCATCATGCAGCAGAAATCAGCTTCCCTTAGTCAAGCTTCTGCTAGTGCTTTCAAGAAAGTTTTCCGGGATATCCAGAAT
TTGGTATATAATTATGCAAGCAACGACAATTCGTTACTGGCTATGTTAAAAGCTGGGAGTAAGGGCAACCTGCTAAAACT
GGTCCAACACAACATGTGTCTGGGTTTGCAGCAGTCTTTGGTTCCAGTGTCATTTAGAATGCCCCGCCAACTTTCTTGTG
ATGCATGGAACAATCATAAATCACATCTTGTTATTGAGAAACCGCATAAGGTTCCTGAATGCCCTGGTTCTTACATCCCG
TCTGCTGTGGTCAAAAGTTCATTTCTTGCGGGTTTGAATCCTCTAGAGTGTTTTGTGCATTCATTAACCACCCGTGATAG
TTCTTTTAGTGGACATGCTGATGTTTCTGGCACTTTGAACCGCAAACTTATGTTTTTCATGCGTGATCTGTACGTTGGAT
ATGACGGAACAGTGAGAAATGCTTATGGGAATCAAATTGTGCAGTTCTCTTACTACGAAGCAGAGCAAATTGCTTCCACT
AAGGTCACTGGTGAAGCCCTAGAAAGTCATAACCATGCAATTGGTGGTCATCCTGTTGGTTCATTGGCAGCCTGTGCCAT
TTCAGAAGCTGCATACTGTGCTTTGGATCAACCTGTCAGTGCACTTGAGTCATCACCTTTACTAAACCTGAAGGTTATCT
CTCTATTTCTGCTGATTTATACTTTTAGGCTGCTATACTATCTTGTGCTTGCTAAATCAATATTTTTAAGGATGAGTTCT
TGGAATCTATGATCTACTAATTTCTCTGTCAAATACCCTTTTTGGTATTTGGATGTGACTTGTACAGAAAATTTTAGAAT
CTGGAGCGGGGAGTCGTACTGGCGAGAAAACTGCATCAATGTTTCTTTCAAAAAGACTTGGCAGATGGGCTCATGGTTTT
GAATATGGAGCTTTAGAGGTCAAGGGTCATCTGGAAAGGCTTCTTCTTTCTGAAGTTGTTTCTACAGTAATGATATGGTG
CACTCTCTTCTTGCATTTTCGCACTTCCTCTATCCAGTTCTATTGATATCATTATCATTATTTCTTGTCTGACTAGAGAT
TCTATAATGTAGCTTCTCCCCCGAAACACGTAAAAGCACTCACAATTGTCCCTGGGTCTGTCATTTTCATATTGATAAGG
TAATGCAGTGAGACATTCATTTCTTTATTTTAATAGTCTTGTCCTCTTAGATTTCTGTTCTCTCAGGAAAATGTGAAGAC
GAGAAGGCTGAAGCTGAGATCAGTTTTAGATGCTCTTAATATGAGATATAGAGCTGCAACAACGAAAGCCGGGAATGATC
TTCCAAATCTGCATATAACGTGCAAGTAAGATGCTTTGCTTTGAGTTTCATTTCTTAATTTTTAATGGATGCATGGAAAT
GGAATTTGGAATATGAGGAAAGTAAATTCAATTATTCGCTCTCAGCTCTTAGTGTTACGAAATCAAATCATTCTGAATCC
TCCACTACCTTATTGCACTTCTACTGTCTCTTGGTCACTGTTTAAGCCCTTGTATTCCTTTAATAACCCTTGTAAATGTG
CAGGGATTGTTCAGTTGCTGAAGTGCAAAAAGAGAAATCCGAAATTTGCATCACTGTTTCTGTGGTTGAGACCTCAAAAG
ATCCTTCTTCACTGCTGGATACGCTTCGTGATGTGGTGATTCCATTCCTTCTTGAGACGGTGATAAAAGGTTTAGATCTT
TTTTCTACTTTGTGAATTACTAATTGCCAAGCTGATGTCCTTGAGCTATGTTCTTGTTTATTAGTTATCCTTTTTGTGAA
AGCCGTTTCATTTGTGCTGTTAATTGTTATAAAGAACATGGAATCTGTTCTTGGCTTGTTATGAAGAAGTTTCACTTGTA
CTGGTTATGAAGGGTCATGTATTTATAAAACTGGTTTTCCTCGTCTGTCAGTATCCATTCCAGCTGATGACCATTGAATC
CATTCCGATTATGACTACAGGACCAGTTATCAGAATCTTTTAGTGATTTTTAACTAAAATTTGGTATAGATGTTTATATT
GTTTGAAACTTAATTGTCTCAAGGGGCTCAAAACATTTTATAAACTTGTTGGCAAGTTTAATGTGGGTTTAGAAATCATG
AAGTATACTTGCTATTTACCTATGCATTGGTCCTTACAACTTATTTTGATTTACTGATGTTGCTATAAAGATGAAGTAAA
ATAATAAAAGAGAAACAGCCTTTTTCTTGCATGAGAATGGGAAAAGGAGGCTGCTTGATACGGGTGGTATCAGGATTAAA
TTATAGGTTAGATTTTTAACAACTGTTGAGTGATGATTATTGATGAATGAAGATAGAGGCTTTATAAGAACTTGAGTGAG
CTTTTACAGAGCTAAAGTTGCAGATAAGTTCTAGCATCTAGAACATGGAGTTGTCTTTAAATCATTTCTATTGGTTATGT
CCTGATCTTCATGAAGAAGATTGCAATTTGCATTTGAATTGTCACTGTTTTTTGGCCTCATTAGATTATTGAACAAATTG
AATTATTTCCACCAAAGATTGCAAAAGGTTAATGAATAGCATCCATCACTCATGACATTTCAAGTGAATTTGAGTTTAGA
CATTTGTTCTATAAAAGTTGTGGCACGATGTCGTCTTGTTGGATAGTTTTTGTTATCTGTGGAGCTACTGTTCTGCTATC
ATTTGATCTGATGTTCCATCTTTTAGGTTTCTCCGCATTTAAAAAGGTTGATATCTTATGGAAAGAGTTGCCAAGTCCAT
CAAAATCTTCCAGAGGCCCTACAGGGGAGCTATATTTGCAGGTCTTCATGTCAGAAAGTTGTGACAGAATCAAATTCTGG
AATGCGCTTGTGGATAGTTGCCTCCAGATAAGGGATTTGATTGACTGGGAACGCAGTTATCCTGATGATGTCCATGATCT
GACTGTAGCCTATGGAATTGATGTAGCATGGGAGTACTTTCTATGTGTAAGTTCTTGTTGTGAGATGATCTCTCTTTTAT
AGTCATAATTTTCTACAGCTATTTCATTTCTTTGTTGCTATTATGCAATCACGTTGTCCTTCCAAACTGGTAGTCATAGT
ATTTCTCGTGTACTTTCTTGTCCTTCAATTTTTGTTACTACTGTCGTTTGTACTTCCTAAAGTATTTGCCGTAATTTCTT
CACTTCTGTTGTTTCTTTTTTGGTACGTCTTTCCTTGAGCCGAGGTCTATTGGAAACATCTCTTTGCCTCCCTAGGTAGG
GGTAAGGTCTGCTTACTTTACCTTCCCCAAACACCACTTGTGGGATTGCTGTTACCCTGATGTTAACGTTATTCCACTTA
CCGTTCCTTTTGTTCTATACTTCTAGAATATAATGGTATAATACTTCTCCATAAAGATAAGGTACAATTCTGACAATGTT
GAGTTAAACTGCAGAAACTACATTCAGCTGTCTCTGAAACTGGCAAGAAAATCCTTCCCGAACACTTGGTACTTGCAGCA
GATAGTCTCACAACTACAGGAGAATTTGTTCCCTTGAGTGCCAAAGGGCTGACACTGCAAAGAAAGGCTGCTGGTGTTGT
TTCACCATTTATGCAAGCGTGCTTTACGGTAATGTGATCCACATTTTACCCTTGTTGGCTTAAGAAAAGAATTTGGATAT
AATTTTAAGTCTCACCACTTTTCTTCCACCTTTTCCTTTTTTCGATTACTTAACTTCTAACATTACGAGTATTGATATTA
ATATGTCAAGGAGATGTATCTCTGAGTTTTGAATCTTTGATGCATGTTGAACCAAATGCAGAATCCAGGGGACTCGTTTG
TTAGGGCTGCCAAGATGGGATTAAGTGACGATCTTCAAGGGAGTCTTGAATCATTGGCATGGGGAAAGACTCCTTCCATA
GGGACTGGTTCTTCATTTGACATTATGTACTCTGGAAAGGTAATGAATCAATTTTCTGTTAGTGAATTGCACATTCATAT
TTTTTTTTGTGGAGTTACTAAGCTGGTGTAACGAATTTTACTAAGAACATCGCTTGTATTATCGACCAACCAAGTTAACT
CTTTTGCTTTGGCAATTTTCGGAGGATCTGATCCTTGTTTATTCATGTGTTCCAAACATCAGGGATATGAGCTGGCTGAA
CAGATAAATGTGTATACTCTGCTGCGAAACCTTGTCACAGTGGATACGCCAAATGTGAAGGTCACTCTTGGTAAAGACGG
TGGAATGGATGGAATGTCTCTTGTACGACGTCTTGATAGGCTTGATGATCTCGATAAAAAGAGTTGTAAAAGCGAGTTGT
CATTTACAAAGCTGAGAAGTTACTTTTCATTCAACGACATAAAAAAGCTCTCTCAGTCATTGAAGCAAATGTTGTCCAAG
TATGTCAATGCTTCTCTAGTGCAATTCCTAATTCATTCCTTTTTACAAAAAAAAATAAAAATGACTCCGATTTTCTATTT
CATTGAAACAGTTTATTTCTGTTAAATTGTTATCTTTGGAATTCGCTTGCTTTTTCTTCTGTTCCTTTGAAATTAAGTTT
CAAAGTTATCAGACTGTTAATCTGAACTAGTCAGGTTGGAGAATATGTTTCTTGTGTTCCTTTGAAGTTTCGAGTATGTT
AATCCGAACTAGTCGCATTGGAGAATATATTTGAGGAACATCTTGTTACTTTAGAATCTTACTGTAGCTTCTGCATGAAA
GAAGAACAAGGAGTCAAAGTGGTTGAATAAGAAATGATGGAAACCAATCGTTATTTCTCACTCACTTATAATTGTTAAAA
ATGGTGCAGATATGATATCGGTCGCGAGTTGAATGAAGCAGACAAGTGCCTAGCAATGATGGCATTACAATTTCATCCTC
GACGGAATGAGAAGATTGGAAAAGGAGCACCAAAGGAAATTAAGGTGAGCTAGATGATAGTGTTCTTGATTATCAGACAT
ACAATACTTACTAAAGAAAGTCGTGATATGAATGCAAATGTTTAGAATTCGATCAATACGTTCTTCATTTTCTGCTATAT
CTACTTATGCTTTTTCCTTTCATCACAGATTGGTTACCACCAAGAGTTTGAAGGCTCCCGCTGCTTTATGGTGGTTCGTT
CAGATGACACAGTTGAAGACTTCTCATATCGCAAGTGTATGCAACATGCTCTGGAACTGATTGCTCCTCAGAAGGCAAAA
ACCTCTAGATGGTTGAATGGAGCATCAGCCTAAGTTGCTGTTTTGGTTCACTTGGTTACGGTTATGGTACGCGTAATAAA
TATGGTGTGTGTTTTGTATCTGTGGCACGAATATGTGCAATTTTCGAACACCTGTTAGACAATTGATGTACTCATGTAAA
CATAGTTTTGTGCTATATCCGTAAACCAATTTTCGTATGCCCCGTTATCTTATGCTTCTTTTTGCTGCTCCCACTAAGGT
TT
AGATGTAAAGCCTTTTTAATAATGTCCAAGCTTTTAGATGGAACAGTGAACTAGCTTATCTCTGTGTTTTCACTAGGGAA
TTGTGTTTTTGCTGTCTTTGCTTCTGTTCTTTGGTGCATCTGATTAACTTTCTGGCCTTCAGGTATACAGCATTCTGAAA
GATATTGATCCAGGGTTTCTTGAAGGACTTCTCAGAAGGAAGAATTCAATCTTCCTTAAAAGCTGCCTTTTGACTCCTAA
TAGTCATCGTGTCACAGAATTTGGGCAGCACATGATATTTGTAAGTGAGAAAATGTGTCTTTTCTTTTCTGGTAGCATTG
ATACCCATTTTTGGCACTCAGCTTTCTAATACGTGGTCACGTGCTGGTTTTAATGTCCCAGGATGAAAGCAATAGGCTTT
ACAGAAAGTTGATTGACTTTAGAGGGACAGCAAATGACTTGAGCATGTGCGTTTTAGATAGAATTAAAGTTTCAAAGGTA
AGAAATGCAACCACGTTTCTCCTTTCCCTTTCTTTGTCAGTTTTTTGTAGAACTACATTACATTTGAATTGAGCCTTTAC
GATTGCAGATACGTGCAGATAGATCGGTAATCAATGATCCTAATGCCCCTGCTACTGGTTTGAAGTATGTGAAAGAATTG
GTTCTAGCAAAACGCACTAATCATGCTTTCCGCATGGTTGTGGTTGGTGATCCTAACATAGAGCTAGGTGAAATTGGTAT
TCCATGTCATGTTGCAGAGAATCTCCACATGGCAGAAACTCTCAGTTTACGGAATTGGGAAAGGATGACTGATCTCTGTG
ATCTTATGATTCTTCAGAGGGGAGGGATTCTTGTCCGTAGAAATGGTGTCTTAGTTCGTATTAGTGTAATGGACGGGTTG
CAGAAAGGGGATATTATACATAGACCCCTTGTCGATGGAGATGTTGTGATGATAAATCGACCTCCGTCTATTCATCAACA
CTCGCTAATTGCTCTGTCTGTTAGGATTCTTCCTATAAATTCTGTTCTTTCAATCAATCCCCTTGTCTGTTCTCCATTCC
GTGGGGATTTTGATGGTGATTGCCTTCATGGTTATATTCCCCAATCAATTGATTCTACGATTGAGCTTAGTGAGCTTGTT
GCTCTGAAACAACAGTTGCTTGACGGACAGAATGGTCAAAATCTTCTTTCATTAAGTCATGATAGCTTGACTGCTGCTCA
TTTAATTTTGGAACCTGGAGTTTTCTTGGACCGTTTCCAGATGCAGCAGTTACAAATGTTTTGTCCACGTCAATTGGGAA
TGACTGCTATCGTAAAAGCACCACCAGGAAACATCTGTTATTGGACTGGCAAACAGTTATTCAGCTTGCTTTTGCCATCA
GACCTTGAATATGTTTTTCCATCAAATGGTGTCTGTATTAGTGAGGGGGAAATTGTGACTTCTTCTGGCGGGTCTTCTTG
GCTGCGTGATGCCAGTGATAATCTTTTTTATAGTCTTGTTAAACACAATGGAGGTGATACTCTTGACCTCCTTTATGCTG
CACAAACAGTTCTTTGTGAGTGGTTGTCAATGAGAGGCCTTAGTGTTTCATTGTCCGATCTTTACATATCTGCTGATTCA
TATTCCCGCGAAAATATGATTGATGAAGTCTGTTCTGGTTTGCAAGAGGCAGAACGGCTGTCTTACATCCAGCTGCTGAT
GATAAAGTATAATAAGGATTTCCTTTCTGGGAACTTAGAAGAAAGCAAGAACTCCATGGGTTTTGATTTTGAGTTTATGT
CCATCATGCAGCAGAAATCAGCTTCCCTTAGTCAAGCTTCTGCTAGTGCTTTCAAGAAAGTTTTCCGGGATATCCAGAAT
TTGGTATATAATTATGCAAGCAACGACAATTCGTTACTGGCTATGTTAAAAGCTGGGAGTAAGGGCAACCTGCTAAAACT
GGTCCAACACAACATGTGTCTGGGTTTGCAGCAGTCTTTGGTTCCAGTGTCATTTAGAATGCCCCGCCAACTTTCTTGTG
ATGCATGGAACAATCATAAATCACATCTTGTTATTGAGAAACCGCATAAGGTTCCTGAATGCCCTGGTTCTTACATCCCG
TCTGCTGTGGTCAAAAGTTCATTTCTTGCGGGTTTGAATCCTCTAGAGTGTTTTGTGCATTCATTAACCACCCGTGATAG
TTCTTTTAGTGGACATGCTGATGTTTCTGGCACTTTGAACCGCAAACTTATGTTTTTCATGCGTGATCTGTACGTTGGAT
ATGACGGAACAGTGAGAAATGCTTATGGGAATCAAATTGTGCAGTTCTCTTACTACGAAGCAGAGCAAATTGCTTCCACT
AAGGTCACTGGTGAAGCCCTAGAAAGTCATAACCATGCAATTGGTGGTCATCCTGTTGGTTCATTGGCAGCCTGTGCCAT
TTCAGAAGCTGCATACTGTGCTTTGGATCAACCTGTCAGTGCACTTGAGTCATCACCTTTACTAAACCTGAAGGTTATCT
CTCTATTTCTGCTGATTTATACTTTTAGGCTGCTATACTATCTTGTGCTTGCTAAATCAATATTTTTAAGGATGAGTTCT
TGGAATCTATGATCTACTAATTTCTCTGTCAAATACCCTTTTTGGTATTTGGATGTGACTTGTACAGAAAATTTTAGAAT
CTGGAGCGGGGAGTCGTACTGGCGAGAAAACTGCATCAATGTTTCTTTCAAAAAGACTTGGCAGATGGGCTCATGGTTTT
GAATATGGAGCTTTAGAGGTCAAGGGTCATCTGGAAAGGCTTCTTCTTTCTGAAGTTGTTTCTACAGTAATGATATGGTG
CACTCTCTTCTTGCATTTTCGCACTTCCTCTATCCAGTTCTATTGATATCATTATCATTATTTCTTGTCTGACTAGAGAT
TCTATAATGTAGCTTCTCCCCCGAAACACGTAAAAGCACTCACAATTGTCCCTGGGTCTGTCATTTTCATATTGATAAGG
TAATGCAGTGAGACATTCATTTCTTTATTTTAATAGTCTTGTCCTCTTAGATTTCTGTTCTCTCAGGAAAATGTGAAGAC
GAGAAGGCTGAAGCTGAGATCAGTTTTAGATGCTCTTAATATGAGATATAGAGCTGCAACAACGAAAGCCGGGAATGATC
TTCCAAATCTGCATATAACGTGCAAGTAAGATGCTTTGCTTTGAGTTTCATTTCTTAATTTTTAATGGATGCATGGAAAT
GGAATTTGGAATATGAGGAAAGTAAATTCAATTATTCGCTCTCAGCTCTTAGTGTTACGAAATCAAATCATTCTGAATCC
TCCACTACCTTATTGCACTTCTACTGTCTCTTGGTCACTGTTTAAGCCCTTGTATTCCTTTAATAACCCTTGTAAATGTG
CAGGGATTGTTCAGTTGCTGAAGTGCAAAAAGAGAAATCCGAAATTTGCATCACTGTTTCTGTGGTTGAGACCTCAAAAG
ATCCTTCTTCACTGCTGGATACGCTTCGTGATGTGGTGATTCCATTCCTTCTTGAGACGGTGATAAAAGGTTTAGATCTT
TTTTCTACTTTGTGAATTACTAATTGCCAAGCTGATGTCCTTGAGCTATGTTCTTGTTTATTAGTTATCCTTTTTGTGAA
AGCCGTTTCATTTGTGCTGTTAATTGTTATAAAGAACATGGAATCTGTTCTTGGCTTGTTATGAAGAAGTTTCACTTGTA
CTGGTTATGAAGGGTCATGTATTTATAAAACTGGTTTTCCTCGTCTGTCAGTATCCATTCCAGCTGATGACCATTGAATC
CATTCCGATTATGACTACAGGACCAGTTATCAGAATCTTTTAGTGATTTTTAACTAAAATTTGGTATAGATGTTTATATT
GTTTGAAACTTAATTGTCTCAAGGGGCTCAAAACATTTTATAAACTTGTTGGCAAGTTTAATGTGGGTTTAGAAATCATG
AAGTATACTTGCTATTTACCTATGCATTGGTCCTTACAACTTATTTTGATTTACTGATGTTGCTATAAAGATGAAGTAAA
ATAATAAAAGAGAAACAGCCTTTTTCTTGCATGAGAATGGGAAAAGGAGGCTGCTTGATACGGGTGGTATCAGGATTAAA
TTATAGGTTAGATTTTTAACAACTGTTGAGTGATGATTATTGATGAATGAAGATAGAGGCTTTATAAGAACTTGAGTGAG
CTTTTACAGAGCTAAAGTTGCAGATAAGTTCTAGCATCTAGAACATGGAGTTGTCTTTAAATCATTTCTATTGGTTATGT
CCTGATCTTCATGAAGAAGATTGCAATTTGCATTTGAATTGTCACTGTTTTTTGGCCTCATTAGATTATTGAACAAATTG
AATTATTTCCACCAAAGATTGCAAAAGGTTAATGAATAGCATCCATCACTCATGACATTTCAAGTGAATTTGAGTTTAGA
CATTTGTTCTATAAAAGTTGTGGCACGATGTCGTCTTGTTGGATAGTTTTTGTTATCTGTGGAGCTACTGTTCTGCTATC
ATTTGATCTGATGTTCCATCTTTTAGGTTTCTCCGCATTTAAAAAGGTTGATATCTTATGGAAAGAGTTGCCAAGTCCAT
CAAAATCTTCCAGAGGCCCTACAGGGGAGCTATATTTGCAGGTCTTCATGTCAGAAAGTTGTGACAGAATCAAATTCTGG
AATGCGCTTGTGGATAGTTGCCTCCAGATAAGGGATTTGATTGACTGGGAACGCAGTTATCCTGATGATGTCCATGATCT
GACTGTAGCCTATGGAATTGATGTAGCATGGGAGTACTTTCTATGTGTAAGTTCTTGTTGTGAGATGATCTCTCTTTTAT
AGTCATAATTTTCTACAGCTATTTCATTTCTTTGTTGCTATTATGCAATCACGTTGTCCTTCCAAACTGGTAGTCATAGT
ATTTCTCGTGTACTTTCTTGTCCTTCAATTTTTGTTACTACTGTCGTTTGTACTTCCTAAAGTATTTGCCGTAATTTCTT
CACTTCTGTTGTTTCTTTTTTGGTACGTCTTTCCTTGAGCCGAGGTCTATTGGAAACATCTCTTTGCCTCCCTAGGTAGG
GGTAAGGTCTGCTTACTTTACCTTCCCCAAACACCACTTGTGGGATTGCTGTTACCCTGATGTTAACGTTATTCCACTTA
CCGTTCCTTTTGTTCTATACTTCTAGAATATAATGGTATAATACTTCTCCATAAAGATAAGGTACAATTCTGACAATGTT
GAGTTAAACTGCAGAAACTACATTCAGCTGTCTCTGAAACTGGCAAGAAAATCCTTCCCGAACACTTGGTACTTGCAGCA
GATAGTCTCACAACTACAGGAGAATTTGTTCCCTTGAGTGCCAAAGGGCTGACACTGCAAAGAAAGGCTGCTGGTGTTGT
TTCACCATTTATGCAAGCGTGCTTTACGGTAATGTGATCCACATTTTACCCTTGTTGGCTTAAGAAAAGAATTTGGATAT
AATTTTAAGTCTCACCACTTTTCTTCCACCTTTTCCTTTTTTCGATTACTTAACTTCTAACATTACGAGTATTGATATTA
ATATGTCAAGGAGATGTATCTCTGAGTTTTGAATCTTTGATGCATGTTGAACCAAATGCAGAATCCAGGGGACTCGTTTG
TTAGGGCTGCCAAGATGGGATTAAGTGACGATCTTCAAGGGAGTCTTGAATCATTGGCATGGGGAAAGACTCCTTCCATA
GGGACTGGTTCTTCATTTGACATTATGTACTCTGGAAAGGTAATGAATCAATTTTCTGTTAGTGAATTGCACATTCATAT
TTTTTTTTGTGGAGTTACTAAGCTGGTGTAACGAATTTTACTAAGAACATCGCTTGTATTATCGACCAACCAAGTTAACT
CTTTTGCTTTGGCAATTTTCGGAGGATCTGATCCTTGTTTATTCATGTGTTCCAAACATCAGGGATATGAGCTGGCTGAA
CAGATAAATGTGTATACTCTGCTGCGAAACCTTGTCACAGTGGATACGCCAAATGTGAAGGTCACTCTTGGTAAAGACGG
TGGAATGGATGGAATGTCTCTTGTACGACGTCTTGATAGGCTTGATGATCTCGATAAAAAGAGTTGTAAAAGCGAGTTGT
CATTTACAAAGCTGAGAAGTTACTTTTCATTCAACGACATAAAAAAGCTCTCTCAGTCATTGAAGCAAATGTTGTCCAAG
TATGTCAATGCTTCTCTAGTGCAATTCCTAATTCATTCCTTTTTACAAAAAAAAATAAAAATGACTCCGATTTTCTATTT
CATTGAAACAGTTTATTTCTGTTAAATTGTTATCTTTGGAATTCGCTTGCTTTTTCTTCTGTTCCTTTGAAATTAAGTTT
CAAAGTTATCAGACTGTTAATCTGAACTAGTCAGGTTGGAGAATATGTTTCTTGTGTTCCTTTGAAGTTTCGAGTATGTT
AATCCGAACTAGTCGCATTGGAGAATATATTTGAGGAACATCTTGTTACTTTAGAATCTTACTGTAGCTTCTGCATGAAA
GAAGAACAAGGAGTCAAAGTGGTTGAATAAGAAATGATGGAAACCAATCGTTATTTCTCACTCACTTATAATTGTTAAAA
ATGGTGCAGATATGATATCGGTCGCGAGTTGAATGAAGCAGACAAGTGCCTAGCAATGATGGCATTACAATTTCATCCTC
GACGGAATGAGAAGATTGGAAAAGGAGCACCAAAGGAAATTAAGGTGAGCTAGATGATAGTGTTCTTGATTATCAGACAT
ACAATACTTACTAAAGAAAGTCGTGATATGAATGCAAATGTTTAGAATTCGATCAATACGTTCTTCATTTTCTGCTATAT
CTACTTATGCTTTTTCCTTTCATCACAGATTGGTTACCACCAAGAGTTTGAAGGCTCCCGCTGCTTTATGGTGGTTCGTT
CAGATGACACAGTTGAAGACTTCTCATATCGCAAGTGTATGCAACATGCTCTGGAACTGATTGCTCCTCAGAAGGCAAAA
ACCTCTAGATGGTTGAATGGAGCATCAGCCTAAGTTGCTGTTTTGGTTCACTTGGTTACGGTTATGGTACGCGTAATAAA
TATGGTGTGTGTTTTGTATCTGTGGCACGAATATGTGCAATTTTCGAACACCTGTTAGACAATTGATGTACTCATGTAAA
CATAGTTTTGTGCTATATCCGTAAACCAATTTTCGTATGCCCCGTTATCTTATGCTTCTTTTTGCTGCTCCCACTAAGGT
TT
Download sequence region |
Get flanking sequences on SL2.50ch08
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc08g080210.2.1 DNA-directed RNA polymerase (AHRD V1 ***- B9GKP9_POPTR); contains Interpro domain(s) IPR000722 RNA polymerase, alpha subunit
AGATGTAAAGCCTTTTTAATAATGTCCAAGCTTTTAGATGGAACAGTGAACTAGCTTATCTCTGTGTTTTCACTAGGGAA
TTGTGTTTTTGCTGTCTTTGCTTCTGTTCTTTGGTGCATCTGATTAACTTTCTGGCCTTCAGGTATACAGCATTCTGAAA
GATATTGATCCAGGGTTTCTTGAAGGACTTCTCAGAAGGAAGAATTCAATCTTCCTTAAAAGCTGCCTTTTGACTCCTAA
TAGTCATCGTGTCACAGAATTTGGGCAGCACATGATATTTGATGAAAGCAATAGGCTTTACAGAAAGTTGATTGACTTTA
GAGGGACAGCAAATGACTTGAGCATGTGCGTTTTAGATAGAATTAAAGTTTCAAAGATACGTGCAGATAGATCGGTAATC
AATGATCCTAATGCCCCTGCTACTGGTTTGAAGTATGTGAAAGAATTGGTTCTAGCAAAACGCACTAATCATGCTTTCCG
CATGGTTGTGGTTGGTGATCCTAACATAGAGCTAGGTGAAATTGGTATTCCATGTCATGTTGCAGAGAATCTCCACATGG
CAGAAACTCTCAGTTTACGGAATTGGGAAAGGATGACTGATCTCTGTGATCTTATGATTCTTCAGAGGGGAGGGATTCTT
GTCCGTAGAAATGGTGTCTTAGTTCGTATTAGTGTAATGGACGGGTTGCAGAAAGGGGATATTATACATAGACCCCTTGT
CGATGGAGATGTTGTGATGATAAATCGACCTCCGTCTATTCATCAACACTCGCTAATTGCTCTGTCTGTTAGGATTCTTC
CTATAAATTCTGTTCTTTCAATCAATCCCCTTGTCTGTTCTCCATTCCGTGGGGATTTTGATGGTGATTGCCTTCATGGT
TATATTCCCCAATCAATTGATTCTACGATTGAGCTTAGTGAGCTTGTTGCTCTGAAACAACAGTTGCTTGACGGACAGAA
TGGTCAAAATCTTCTTTCATTAAGTCATGATAGCTTGACTGCTGCTCATTTAATTTTGGAACCTGGAGTTTTCTTGGACC
GTTTCCAGATGCAGCAGTTACAAATGTTTTGTCCACGTCAATTGGGAATGACTGCTATCGTAAAAGCACCACCAGGAAAC
ATCTGTTATTGGACTGGCAAACAGTTATTCAGCTTGCTTTTGCCATCAGACCTTGAATATGTTTTTCCATCAAATGGTGT
CTGTATTAGTGAGGGGGAAATTGTGACTTCTTCTGGCGGGTCTTCTTGGCTGCGTGATGCCAGTGATAATCTTTTTTATA
GTCTTGTTAAACACAATGGAGGTGATACTCTTGACCTCCTTTATGCTGCACAAACAGTTCTTTGTGAGTGGTTGTCAATG
AGAGGCCTTAGTGTTTCATTGTCCGATCTTTACATATCTGCTGATTCATATTCCCGCGAAAATATGATTGATGAAGTCTG
TTCTGGTTTGCAAGAGGCAGAACGGCTGTCTTACATCCAGCTGCTGATGATAAAGTATAATAAGGATTTCCTTTCTGGGA
ACTTAGAAGAAAGCAAGAACTCCATGGGTTTTGATTTTGAGTTTATGTCCATCATGCAGCAGAAATCAGCTTCCCTTAGT
CAAGCTTCTGCTAGTGCTTTCAAGAAAGTTTTCCGGGATATCCAGAATTTGGTATATAATTATGCAAGCAACGACAATTC
GTTACTGGCTATGTTAAAAGCTGGGAGTAAGGGCAACCTGCTAAAACTGGTCCAACACAACATGTGTCTGGGTTTGCAGC
AGTCTTTGGTTCCAGTGTCATTTAGAATGCCCCGCCAACTTTCTTGTGATGCATGGAACAATCATAAATCACATCTTGTT
ATTGAGAAACCGCATAAGGTTCCTGAATGCCCTGGTTCTTACATCCCGTCTGCTGTGGTCAAAAGTTCATTTCTTGCGGG
TTTGAATCCTCTAGAGTGTTTTGTGCATTCATTAACCACCCGTGATAGTTCTTTTAGTGGACATGCTGATGTTTCTGGCA
CTTTGAACCGCAAACTTATGTTTTTCATGCGTGATCTGTACGTTGGATATGACGGAACAGTGAGAAATGCTTATGGGAAT
CAAATTGTGCAGTTCTCTTACTACGAAGCAGAGCAAATTGCTTCCACTAAGGTCACTGGTGAAGCCCTAGAAAGTCATAA
CCATGCAATTGGTGGTCATCCTGTTGGTTCATTGGCAGCCTGTGCCATTTCAGAAGCTGCATACTGTGCTTTGGATCAAC
CTGTCAGTGCACTTGAGTCATCACCTTTACTAAACCTGAAGAAAATTTTAGAATCTGGAGCGGGGAGTCGTACTGGCGAG
AAAACTGCATCAATGTTTCTTTCAAAAAGACTTGGCAGATGGGCTCATGGTTTTGAATATGGAGCTTTAGAGGTCAAGGG
TCATCTGGAAAGGCTTCTTCTTTCTGAAGTTGTTTCTACAGTAATGATATGCTTCTCCCCCGAAACACGTAAAAGCACTC
ACAATTGTCCCTGGGTCTGTCATTTTCATATTGATAAGGAAAATGTGAAGACGAGAAGGCTGAAGCTGAGATCAGTTTTA
GATGCTCTTAATATGAGATATAGAGCTGCAACAACGAAAGCCGGGAATGATCTTCCAAATCTGCATATAACGTGCAAGGA
TTGTTCAGTTGCTGAAGTGCAAAAAGAGAAATCCGAAATTTGCATCACTGTTTCTGTGGTTGAGACCTCAAAAGATCCTT
CTTCACTGCTGGATACGCTTCGTGATGTGGTGATTCCATTCCTTCTTGAGACGGTGATAAAAGGTTTCTCCGCATTTAAA
AAGGTTGATATCTTATGGAAAGAGTTGCCAAGTCCATCAAAATCTTCCAGAGGCCCTACAGGGGAGCTATATTTGCAGGT
CTTCATGTCAGAAAGTTGTGACAGAATCAAATTCTGGAATGCGCTTGTGGATAGTTGCCTCCAGATAAGGGATTTGATTG
ACTGGGAACGCAGTTATCCTGATGATGTCCATGATCTGACTGTAGCCTATGGAATTGATGTAGCATGGGAGTACTTTCTA
TGTAAACTACATTCAGCTGTCTCTGAAACTGGCAAGAAAATCCTTCCCGAACACTTGGTACTTGCAGCAGATAGTCTCAC
AACTACAGGAGAATTTGTTCCCTTGAGTGCCAAAGGGCTGACACTGCAAAGAAAGGCTGCTGGTGTTGTTTCACCATTTA
TGCAAGCGTGCTTTACGAATCCAGGGGACTCGTTTGTTAGGGCTGCCAAGATGGGATTAAGTGACGATCTTCAAGGGAGT
CTTGAATCATTGGCATGGGGAAAGACTCCTTCCATAGGGACTGGTTCTTCATTTGACATTATGTACTCTGGAAAGGGATA
TGAGCTGGCTGAACAGATAAATGTGTATACTCTGCTGCGAAACCTTGTCACAGTGGATACGCCAAATGTGAAGGTCACTC
TTGGTAAAGACGGTGGAATGGATGGAATGTCTCTTGTACGACGTCTTGATAGGCTTGATGATCTCGATAAAAAGAGTTGT
AAAAGCGAGTTGTCATTTACAAAGCTGAGAAGTTACTTTTCATTCAACGACATAAAAAAGCTCTCTCAGTCATTGAAGCA
AATGTTGTCCAAATATGATATCGGTCGCGAGTTGAATGAAGCAGACAAGTGCCTAGCAATGATGGCATTACAATTTCATC
CTCGACGGAATGAGAAGATTGGAAAAGGAGCACCAAAGGAAATTAAGATTGGTTACCACCAAGAGTTTGAAGGCTCCCGC
TGCTTTATGGTGGTTCGTTCAGATGACACAGTTGAAGACTTCTCATATCGCAAGTGTATGCAACATGCTCTGGAACTGAT
TGCTCCTCAGAAGGCAAAAACCTCTAGATGGTTGAATGGAGCATCAGCCTAAGTTGCTGTTTTGGTTCACTTGGTTACGG
TTATGGTACGCGTAATAAATATGGTGTGTGTTTTGTATCTGTGGCACGAATATGTGCAATTTTCGAACACCTGTTAGACA
ATTGATGTACTCATGTAAACATAGTTTTGTGCTATATCCGTAAACCAATTTTCGTATGCCCCGTTATCTTATGCTTCTTT
TTGCTGCTCCCACTAAGGTTT
AGATGTAAAGCCTTTTTAATAATGTCCAAGCTTTTAGATGGAACAGTGAACTAGCTTATCTCTGTGTTTTCACTAGGGAA
TTGTGTTTTTGCTGTCTTTGCTTCTGTTCTTTGGTGCATCTGATTAACTTTCTGGCCTTCAGGTATACAGCATTCTGAAA
GATATTGATCCAGGGTTTCTTGAAGGACTTCTCAGAAGGAAGAATTCAATCTTCCTTAAAAGCTGCCTTTTGACTCCTAA
TAGTCATCGTGTCACAGAATTTGGGCAGCACATGATATTTGATGAAAGCAATAGGCTTTACAGAAAGTTGATTGACTTTA
GAGGGACAGCAAATGACTTGAGCATGTGCGTTTTAGATAGAATTAAAGTTTCAAAGATACGTGCAGATAGATCGGTAATC
AATGATCCTAATGCCCCTGCTACTGGTTTGAAGTATGTGAAAGAATTGGTTCTAGCAAAACGCACTAATCATGCTTTCCG
CATGGTTGTGGTTGGTGATCCTAACATAGAGCTAGGTGAAATTGGTATTCCATGTCATGTTGCAGAGAATCTCCACATGG
CAGAAACTCTCAGTTTACGGAATTGGGAAAGGATGACTGATCTCTGTGATCTTATGATTCTTCAGAGGGGAGGGATTCTT
GTCCGTAGAAATGGTGTCTTAGTTCGTATTAGTGTAATGGACGGGTTGCAGAAAGGGGATATTATACATAGACCCCTTGT
CGATGGAGATGTTGTGATGATAAATCGACCTCCGTCTATTCATCAACACTCGCTAATTGCTCTGTCTGTTAGGATTCTTC
CTATAAATTCTGTTCTTTCAATCAATCCCCTTGTCTGTTCTCCATTCCGTGGGGATTTTGATGGTGATTGCCTTCATGGT
TATATTCCCCAATCAATTGATTCTACGATTGAGCTTAGTGAGCTTGTTGCTCTGAAACAACAGTTGCTTGACGGACAGAA
TGGTCAAAATCTTCTTTCATTAAGTCATGATAGCTTGACTGCTGCTCATTTAATTTTGGAACCTGGAGTTTTCTTGGACC
GTTTCCAGATGCAGCAGTTACAAATGTTTTGTCCACGTCAATTGGGAATGACTGCTATCGTAAAAGCACCACCAGGAAAC
ATCTGTTATTGGACTGGCAAACAGTTATTCAGCTTGCTTTTGCCATCAGACCTTGAATATGTTTTTCCATCAAATGGTGT
CTGTATTAGTGAGGGGGAAATTGTGACTTCTTCTGGCGGGTCTTCTTGGCTGCGTGATGCCAGTGATAATCTTTTTTATA
GTCTTGTTAAACACAATGGAGGTGATACTCTTGACCTCCTTTATGCTGCACAAACAGTTCTTTGTGAGTGGTTGTCAATG
AGAGGCCTTAGTGTTTCATTGTCCGATCTTTACATATCTGCTGATTCATATTCCCGCGAAAATATGATTGATGAAGTCTG
TTCTGGTTTGCAAGAGGCAGAACGGCTGTCTTACATCCAGCTGCTGATGATAAAGTATAATAAGGATTTCCTTTCTGGGA
ACTTAGAAGAAAGCAAGAACTCCATGGGTTTTGATTTTGAGTTTATGTCCATCATGCAGCAGAAATCAGCTTCCCTTAGT
CAAGCTTCTGCTAGTGCTTTCAAGAAAGTTTTCCGGGATATCCAGAATTTGGTATATAATTATGCAAGCAACGACAATTC
GTTACTGGCTATGTTAAAAGCTGGGAGTAAGGGCAACCTGCTAAAACTGGTCCAACACAACATGTGTCTGGGTTTGCAGC
AGTCTTTGGTTCCAGTGTCATTTAGAATGCCCCGCCAACTTTCTTGTGATGCATGGAACAATCATAAATCACATCTTGTT
ATTGAGAAACCGCATAAGGTTCCTGAATGCCCTGGTTCTTACATCCCGTCTGCTGTGGTCAAAAGTTCATTTCTTGCGGG
TTTGAATCCTCTAGAGTGTTTTGTGCATTCATTAACCACCCGTGATAGTTCTTTTAGTGGACATGCTGATGTTTCTGGCA
CTTTGAACCGCAAACTTATGTTTTTCATGCGTGATCTGTACGTTGGATATGACGGAACAGTGAGAAATGCTTATGGGAAT
CAAATTGTGCAGTTCTCTTACTACGAAGCAGAGCAAATTGCTTCCACTAAGGTCACTGGTGAAGCCCTAGAAAGTCATAA
CCATGCAATTGGTGGTCATCCTGTTGGTTCATTGGCAGCCTGTGCCATTTCAGAAGCTGCATACTGTGCTTTGGATCAAC
CTGTCAGTGCACTTGAGTCATCACCTTTACTAAACCTGAAGAAAATTTTAGAATCTGGAGCGGGGAGTCGTACTGGCGAG
AAAACTGCATCAATGTTTCTTTCAAAAAGACTTGGCAGATGGGCTCATGGTTTTGAATATGGAGCTTTAGAGGTCAAGGG
TCATCTGGAAAGGCTTCTTCTTTCTGAAGTTGTTTCTACAGTAATGATATGCTTCTCCCCCGAAACACGTAAAAGCACTC
ACAATTGTCCCTGGGTCTGTCATTTTCATATTGATAAGGAAAATGTGAAGACGAGAAGGCTGAAGCTGAGATCAGTTTTA
GATGCTCTTAATATGAGATATAGAGCTGCAACAACGAAAGCCGGGAATGATCTTCCAAATCTGCATATAACGTGCAAGGA
TTGTTCAGTTGCTGAAGTGCAAAAAGAGAAATCCGAAATTTGCATCACTGTTTCTGTGGTTGAGACCTCAAAAGATCCTT
CTTCACTGCTGGATACGCTTCGTGATGTGGTGATTCCATTCCTTCTTGAGACGGTGATAAAAGGTTTCTCCGCATTTAAA
AAGGTTGATATCTTATGGAAAGAGTTGCCAAGTCCATCAAAATCTTCCAGAGGCCCTACAGGGGAGCTATATTTGCAGGT
CTTCATGTCAGAAAGTTGTGACAGAATCAAATTCTGGAATGCGCTTGTGGATAGTTGCCTCCAGATAAGGGATTTGATTG
ACTGGGAACGCAGTTATCCTGATGATGTCCATGATCTGACTGTAGCCTATGGAATTGATGTAGCATGGGAGTACTTTCTA
TGTAAACTACATTCAGCTGTCTCTGAAACTGGCAAGAAAATCCTTCCCGAACACTTGGTACTTGCAGCAGATAGTCTCAC
AACTACAGGAGAATTTGTTCCCTTGAGTGCCAAAGGGCTGACACTGCAAAGAAAGGCTGCTGGTGTTGTTTCACCATTTA
TGCAAGCGTGCTTTACGAATCCAGGGGACTCGTTTGTTAGGGCTGCCAAGATGGGATTAAGTGACGATCTTCAAGGGAGT
CTTGAATCATTGGCATGGGGAAAGACTCCTTCCATAGGGACTGGTTCTTCATTTGACATTATGTACTCTGGAAAGGGATA
TGAGCTGGCTGAACAGATAAATGTGTATACTCTGCTGCGAAACCTTGTCACAGTGGATACGCCAAATGTGAAGGTCACTC
TTGGTAAAGACGGTGGAATGGATGGAATGTCTCTTGTACGACGTCTTGATAGGCTTGATGATCTCGATAAAAAGAGTTGT
AAAAGCGAGTTGTCATTTACAAAGCTGAGAAGTTACTTTTCATTCAACGACATAAAAAAGCTCTCTCAGTCATTGAAGCA
AATGTTGTCCAAATATGATATCGGTCGCGAGTTGAATGAAGCAGACAAGTGCCTAGCAATGATGGCATTACAATTTCATC
CTCGACGGAATGAGAAGATTGGAAAAGGAGCACCAAAGGAAATTAAGATTGGTTACCACCAAGAGTTTGAAGGCTCCCGC
TGCTTTATGGTGGTTCGTTCAGATGACACAGTTGAAGACTTCTCATATCGCAAGTGTATGCAACATGCTCTGGAACTGAT
TGCTCCTCAGAAGGCAAAAACCTCTAGATGGTTGAATGGAGCATCAGCCTAAGTTGCTGTTTTGGTTCACTTGGTTACGG
TTATGGTACGCGTAATAAATATGGTGTGTGTTTTGTATCTGTGGCACGAATATGTGCAATTTTCGAACACCTGTTAGACA
ATTGATGTACTCATGTAAACATAGTTTTGTGCTATATCCGTAAACCAATTTTCGTATGCCCCGTTATCTTATGCTTCTTT
TTGCTGCTCCCACTAAGGTTT
![]() ![]() | translated polypeptide sequence |
>Solyc08g080210.2.1 DNA-directed RNA polymerase (AHRD V1 ***- B9GKP9_POPTR); contains Interpro domain(s) IPR000722 RNA polymerase, alpha subunit
MIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIE
LGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDGLQKGDIIHRPLVDGDVVMINRP
PSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHD
SLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTS
SGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLS
YIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSK
GNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHS
LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIGGHPVGS
LAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEV
VSTVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEK
SEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIK
FWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSA
KGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYT
LLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRE
LNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSRW
LNGASA*
MIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIE
LGEIGIPCHVAENLHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDGLQKGDIIHRPLVDGDVVMINRP
PSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLDGQNGQNLLSLSHD
SLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTS
SGGSSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLS
YIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSK
GNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHS
LTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIGGHPVGS
LAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEV
VSTVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEK
SEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIK
FWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSA
KGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYT
LLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRE
LNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSRW
LNGASA*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
![]() ![]() | [Associate new genbank sequence] |
DQ020654 Lycopersicon esculentum RNA polymerase IV largest subunit (RPD1) mRNA, partial cds.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
A multistep process gave rise to RNA polymerase IV of land plants.
Journal of molecular evolution (2007)
Show / hide abstract
Show / hide abstract
Since their discovery in Metazoa, the three nuclear RNA polymerases (RNAPs) have been found in fungi, plants, and diverse protists. In all eukaryotes studied to date, RNAPs I, II, and III collectively transcribe all major RNAs made in the nucleus. We have found genes for the largest subunit (RPD1/RPE1) of a new DNA-dependent RNAP, RNAP IV, in all major land plant taxa and in closely related green algae. Genes for the second-largest subunit (RPD2) of this enzyme were found in all land plants. Phylogenetic study indicates that RNAP IV genes are sister to the corresponding RNAP II genes. Our results show the genesis of RNAP IV to be a multistep process in which the largest and second-largest subunit genes evolved by independent duplication events in the ancestors of Charales and land plants. These findings provide insights into evolutionary mechanisms that can explain the origin of multiple RNAPs in the eukaryotic nucleus.
Luo, J. Hall, BD.
Journal of molecular evolution.
2007.
64(1).
101-12.
![]() ![]() | [Add ontology annotations] |
biological_process
|
cellular_component
|
molecular_function
|
![]() ![]() |
- Genomic details
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