Clone hba-25b4

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Clone
Clone name hba-25b4 LE_HBa0025B04 C10HBa0025B04 P025B04
Clone type BAC
Contamination none
Estimated length 97,059

Library
Name Tomato HindIII BAC Library	Cloning host E. coli
Organism Solanum lycopersicum (formerly Lycopersicon esculentum)	Cloning vector pBeloBAC11
Accession Heinz 1706	Restriction enzyme HindIII

Ordering Information
BAC Clones BAC clones can be ordered from the clone ordering page at TFGD

Physical mapping

Fingerprint Contig Builds (FPC)

not present in Tomato FPC (AGI 2005)

Marker matches - overgo what's this?

None

Marker matches - BLAST

None

Marker matches - manual

None

Physical map (from marker matches)

Not on Physical Map

FISH map

Not on FISH map

FISH images

None

IL Mapping

None

Sequencing

This clone is being sequenced by the Chromosome 10 Sequencing Project. (View projects)
Log in as a curator or sequencer to edit this clone's registry information.

Sequencing Project

Chromosome 10

HTGS phase

3 - finished

Sequencing Status

complete

Sequencing Organization

Uploaded by account 'manual'

Full Sequence

134,424 bp
C10HBa0025B04.1
AC244306.2 (GenBank)

[View]
[Download fasta]
[Download full submission] (0.08 MB)

End Sequences

LE_HBa0025B04_SP6_135595 (Good)
LE_HBa0025B04_T7_135596 (Good)

Warnings

none

FTP

Chromosome 10 Sequencing repository (FTP)

Chromosome Assembly

this clone is not part of a chromosome assembly

Restriction Fragments

HindIII in vitro (24)

1091, 1270, 1390, 1414, 1601, 1854, 2126, 2187, 2637, 2686, 2830, 3045, 3270, 3423, 3863, 4413, 5735, 5958, 6004, 6117, 7129, 8215, 8904, 9897

HindIII in silico (31)

1010, 1150, 1306, 1692, 1984, 2039, 2047, 2065, 2256, 2295, 2861, 2969, 3003, 3011, 3330, 3452, 4208, 4256, 4665, 4817, 5026, 5142, 5298, 5343, 5452, 5742, 6383, 8013, 9001, 9310, 10745

Fragment Lengths Match Score

0.85

Annotations

Browse

LE_HBa0025B04 has no browsable sequence annotations

Download

temporarily unavailable

User comments

None

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Seq. Center Reported Status

Estimated Length

bp and

GenBank Accession (version insensitive)

e.g. AP009318.1 or AP009318

Sequencing on Chromosome

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Annotations

End Sequences

e.g. crystallin

Overgo match to marker what's this?

Map	Map position cM and
Chromosome / Linkage Group

IL Bin Mapping

Assigned to project	Mapped to chr
Mapped to bin

Verification

Verified with internal read resequencing
Verified by bac end resequencing

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Clone hba-25b4

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