Clone Read LE_HBa0143A01_T7_88705

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0143A01_T7_88705
Primer
T7
ID from Seq. Facility
LE_HBa_143_A01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1169 raw
Sequence
>LE_HBa0143A01_T7_88705 (raw untrimmed)
AGAAAAAAGAAAAAAGGAAACAAAAGAGGGGACAAAAAAAAAAAAAAGAAAAAGCGAGGAGCAGTACTAAGACGACGAAGAAAGGACAAAAAAAAGGNGG
ATAGGACCAAAAAAAGAAAGCCTTCCAAATAAAGAGAGGNNNNNNNNNNNTAAAAAAAGAAANAATAAAAAAGAAGGAAGAAACAATAAAAAAAGGAGGN
NNNNNNNNAATATNGGAGAGAGAAGAGNNGAANNAGNNNNAGAANNGAAAAGANNANNANGAGAGAGAAGGAAAGGGAGNNGAAAAAAATCACAAAAAGA
AANNNNNNNNNNNNNNTNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGAGGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNGNGNNGNNNNGGGGGGGGGNNGGNGG
GGGNNGGGGGGGGGGGGGGGGGNGNNGGGGGGGGGGGNGGGGGNGGGGNGGGGGNGGGGGGNNGGGGGGGGGGGGGGGGGGGGGGGGGNNNGNNGNGNNG
NNNGGGGGGGGGGNGNGGGGGGGNGGGGGGGGGGNGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGN
NGGGGGNNGGNNGGGNNGGNGGGGGGNGNGGNGGNGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGNGGGGGGGGGGGGNGGGGGGGGGGGGGG
GGGGGGGNNGNGGGGGGGGGNGNGNNNGGGNNNGGGGGGGGGGGNGNNGGGGGGGGGNGGGGGGGGGGGNGGGNGGGGGGGGGNNGGNGGGGGGGCAGGG
NGGGNGGNGGGNNNGGNGGGNGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGNGGGGNGGGGGGGNNGGNGGNNGGGGGGGGGGGGGGGGGG
GGGGGGGGNNGGGGNGGNNGGGGGGGGGGGGGGGNNGGGGGGGNGNNGGGGNNGNNGNGGGNGGGNGNG
>LE_HBa0143A01_T7_88705 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.78019
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0143A01
Clone
Clone name
hba-143a1
LE_HBa0143A01
P143A01
Clone type
BAC
Contamination
none
Estimated length
105,776
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found