SGN Marker TG602

SGN-M297

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
2100
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG602 RFLP image
Forward sequence
GTAGAGAGAAAGATAGAACCTATAAATTAAAAATAGGGAAAAAAAAACATAATATACTTCTTCAAGTAATAATTCAACCCATCAATTATC
AAAAAAATGCTTTCCTCCCTTTCTCACACCTCTTCTTCCGCCACCGCTTTCTTCCTCTCTTCCTCCGCCAAATTTCTCCGACCCAGATTC
TCTTCTTGTCCTTTCCAGTTCCCAATTCATCAAAAACGACACCGTTCTCTGTTTTCTCATAGCACAGCAGCTTCAATGGACTCGGCTGCC
ACCGTTGATTCAGTTGCTGATGATTTAAAGAAACAAAACTTAAAAGGAGTTGAAATTAAGCTTAAATTGAATCTCGAAGAGCTTAATTGG
GATAACTCTTTTGTTCGTGAACTACCTGGCGACCCCAGAAGTGATAGTATTCCAAGAGAGGTTTGTGTTCTAATTTCTCAAAGATTGAAT
CTTTATTTGATTGAATGTAAAAGGTGTGTCTTTTTATTGGGGATATTACTCTTTATGGG
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGGGTAGAGAGAAAGATAGAACCTATAAATTAAAAATAGGGAAAAAAAAACATAATATACTTCTTCAAG
TAATAATTCAACCCATCAATTATCAAAAAAATGCTTTCCTCCCTTTCTCACACCTCTTCTTCCACCACCGCTTTCTTCCTCTCTTCCTCC
GCCAAATTTCTCCGACCCAGATTCTCTTCTTGTCCTTTCCAGTTCCCAATTCATCAAAAACGACACCGTTCTCTGTTTTCTCATAGCACA
GCAGCTTCAATGGACTCGGCTGCCACCGTTGATTCAGTTGCTGATGATTTAAAGAAACAAAACTTAAAAGGAGTTGAAATTAAGCTTAAA
TTGAATCTCGAAGAGCTTAATTGGGATAACTCTTTTGTTCGTGAACTACCTGGCGACCCCAGAAGTGATAGTATTCCAAGAGAGGTTTGT
GTTCTAATTTCTCAAAGATTGAATCTTTATTTGATTGAATGTAAAAGGTGTTTCTTTTTATTGGGGATATTACTCTTTATGGGG
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1550792.3e-0686 (16.9% of RFLP seq)+
SGN-U166528325 (63.9% of RFLP seq)+
SGN-U1550792.4e-0686 (16.1% of RFLP seq)-
SGN-U166528325 (60.9% of RFLP seq)-
Mapped locations  
Map: Tomato QTL map   
Map version
137 (location: 53905)
Chromosome
12
Position
86.20 cM
Confidence
uncalculated
Protocol
RFLP

Pentanal_content_pna12_1 Fruit_weight_fw12_1 Titratable_acidity_ta12_1 Fruit_diameter_fd12_1 pH_pH12_1
Tomato QTL map

Map: Potato meta-QTL consensus map   
Map version
107 (location: 53364)
Chromosome
12
Position
54.92 cM
Confidence
uncalculated
Protocol
unknown

MQTL_2_Late_blight_12 MQTL_1_Late_blight_12
Potato meta-QTL consensus map

Map: Tomato-EXPEN 1992   
Map version
28 (location: 8833)
Chromosome
12
Position
91.80 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 8832)
Chromosome
12
Position
62.80 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992
Overgo hybridization and physical mapping 
TG602 was used as an overgo probe on plate 15 [well H10]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

P292L02,   P030J22,   P016F23,   P193B22,   P009O22,   P165K19,   P143F04,   P193D22,   P035H23,   P254J11,   P184B11,   P286F09,   P108M03,   P163B13,   P035A11,   P162K07,   P288E16,   P172E03,   P004A15,   P165B19,   P273F16,   P163C05,   P054I08

 Overgo Sequences

A sequence
TCTTCCTCTCTTCCTCCGCCAAAT
B sequence
AATCTGGGTCGGAGAAATTTGGCG
AB sequence
TCTTCCTCTCTTCCTCCGCCAAATTTCTCC
Marker sequence
GTAGAGAGAAAGATAGAACCTATAAATTAAAAATAGGGAAAAAAAAACAT
AATATACTTCTTCAAGTAATAATTCAACCCATCAATTATCAAAAAAATGC
TTTCCTCCCTTTCTCACACCTCTTCTTCCGCCACCGCTTTCTTCCTCTCT
TCCTCCGCCAAATTTCTCCGACCCAGATTCTCTTCTTGTCCTTTCCAGTT
CCCAATTCATCAAAAACGACACCGTTCTCTGTTTTCTCATAGCACAGCAG
CTTCAATGGACTCGGCTGCCACCGTTGATTCAGTTGCTGATGATTTAAAG
AAACAAAACTTAAAAGGAGTTGAAATTAAGCTTAAATTGAATCTCGAAGA
GCTTAATTGGGATAACTCTTTTGTTCGTGAACTACCTGGCGACCCCAGAA
GTGATAGTATTCCAAGAGAGGTTTGTGTTCTAATTTCTCAAAGATTGAAT
CTTTATTTGATTGAATGTAAAAGGTGTGTCTTTTTATTGGGGATATTACT
CTTTATGGG
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of TG602  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D297 marker 297
Please wait, checking for comments about marker 297

‹March 2025›
SuMoTuWeThFrSa
2324252627281
2345678
9101112131415
16171819202122
23242526272829
303112345
‹March 2025›
SuMoTuWeThFrSa
2324252627281
2345678
9101112131415
16171819202122
23242526272829
303112345
‹March 2025›
SuMoTuWeThFrSa
2324252627281
2345678
9101112131415
16171819202122
23242526272829
303112345
‹March 2025›
SuMoTuWeThFrSa
2324252627281
2345678
9101112131415
16171819202122
23242526272829
303112345