Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U568598 in the current build, Tomato 200607 #2

Unigene SGN-U317107

Unigene Basic Information

Unigene ID:	SGN-U317107
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317107
mRNA sequence:	Length: 3231 bp

>SGN-U317107 Tomato 200607 #1 (18 members)
TCACAATTGCACAAGTAATTTGAATTCTCATTATTTTTTTTCTATTTGTTTGCTAGAAATAAATAAATAAATAAATTGACACGTGGCAAG
GGCTACGTGTCATCACAGAGATACATGTATCCACGTCAGCGTCTCTACACCACCCAAGTTACGATCCGGAACCCAGACCCGAATTACACG
TATCCATATGCTGGCTGGCACGAGGCATCTCCTTCGATATGGTAGTCAACAGATCCCCTAATGATAAAATAAAAGTAAAATCACTTTCAG
TAAATTAAATTATTTATCGCCTAGAATTTAGAGAAAAATAGAAAAACAAAATAGGTAGTAGTAATAAAATATTATCGATAATTTGTCATA
GAATAGTTCATTTGTGAGCTACATTCAACTGCCAATACTTTTTCCGATGCTCTTCCGTCAACTTCAACGGCCATTTCCACAATCGGCAAC
TTATACTTCACTTTTATAACAAAGCGATTTTGCTTATTCGGTCCCAGCGGCGATGGGCGGCGGCGGTCCCAGAAATTATTCGGCGAATCC
AAATGATTACAAGCTTCTCGAAGAAGTCGGTTATGGAGCGAGTGCAACAGTTTATAGAGCGATCTATCTTCCTTACAATGAAGTTATCGC
AGTCAAGTGCTTGGATCTCGATCGCTGTAACAGCAATCTGGATGACATACGCAGGGAAGCTCAAACTATGAGTTTGATAGACCATCCTAA
TGTAATAAAGTCATTCTGTTCATTTGTTGTTGAGAACTACCTATGGGTGGTAATGCCCTTCATGGCTGAGGGCTCTTGTCTACATCTCAT
GAAAATAGCATATCCAGATGGATTCGAAGAATCTGCTATTTGTTCTATGTTGAAGGAAACTCTCAAGGCGTTGGAATATCTCCATCGACA
TGGGCACATACATCGAGATGTGAAGGCTGGGAATATATTACTGGACACTAATGGGGCAGTAAAGCTGGGCGATTTTGGTGTTTCCGCATG
CATGTTTGACAGTGGTGATAGACAGCGGTCTAGGAATACCTTTGTAGGAACTCCGTGCTGGATGGCACCAGAAGTTCTGCAGCCTGGAAC
TGGATATGATTTTAAGGCTGACATTTGGTCATTTGGAATAACTGCCCTGGAATTGGCTCATGGTCATGCACCATTTTCAAAGTACCCTCC
AATGAAGGTACTTCTGATGACAATACAGAATGCCCCTCCTGGACTTGATTATGACAGAGACAAAAAATTCTCTAAGTCATTCAAGGAAAT
GGTTGCGATGTGTTTGGTGAAAGATCAAACTAAAAGGCCAACTGCTGAGAAGTTGTTGAAGCATTCATTTTTCAAATATGCTAAGCCCCC
AGAGCTTTCTGTAAAAAAACTCTTTGCTGACCTGCCACCACTTTGGAATCGAGTTAAAGCTCTACAGCTTAAAGATGCTGCCCAACTAGC
TTTGAAGAGAATGCCTTCTTCCGAGCAGGAAGCATTATCACAGAGTGAGTACCAACGGGGAGTTAGCGCCTGGAACTTTGATTTGGAGGA
TTTAAAGCTTCAGGCTTCACTGGTACAGGACGATGATGAAATACAAGAAATTAAGGAAGAAGATGATACCATCAAAGCTTATATGAACTA
CAAGGAGAAATCTGTTGCCCTACAATATGCTGGAAAATCAACCCCTAGAAAAGATTCTATTGCCAGTGAGCAAGAAAGTATTGGTGAAGT
GCCAGTAGCTGAATACGAGATCAAGAAGGGAAAAGATTTGGAGAGCAGTACACCAGATTCTGATCATTGGGAGAAAAATGGACTGAAGAA
GAATGCATCAAAAACAGAGTTGCCACCCCTAACCTCAGACAGGGATGTCTTACCAGCCAAGAGTAGAACTCAAACACCAAAAGCTCGTCA
AAGTCAGAGTGGACCACTTATGGCTGGCGCTGTACTTAGTCACTCGGCATCAGAAAGAGTTCGAAGCTCCGAAAGAAGTGAGATTGAAAA
CCAACAACCAGGAGATAAAGCTCATCCAGTGCGAAGAGCACCCAGCTTTAGTGGGCCTTTAATGCTTCCAAATCGAGCTTCAGGAAATAG
TTTATCAGCTCCGATTAAATCATCTGGGGGATTCAAAGATTCCTTGGATGACAAGTCGAAGCCGAACTTGGTCCAAATAAAAGGCCGTTT
CTCTGTAACATCAGAAAATGTAGATCTTGTAAAGGATATTCCATTATGTACAGTTCCTCGACGATCTTCTCAAGGATCACCACTTAGGAA
GTCTGCTAGTGTTGGAGAATGGCTGGTCGAATCTAAACAAATGCCACCCAGTCAACCGCCCAAGGAACTTGGCGTTAATAATGTTCCTGC
TTCAGTTCTCATGCCTCACTTACAAAATCTCTTTCAACAGACGTCAATTCAACAGGATCTCATTGTAAATCTATTGAGTAGCTTGCAACT
ATCTGAGGCAGGAGATTCTTCTCAAAATGGGAAGTTATCTCCCTTACAGCGCCCAGAGAGCAATGGAATTGTTGAAGCAGCTGTTTCTGA
GAGGGAGAAGCTATTATTAGTCAAAATATCTGAGCTTCAGGCTAGGATGATTAATTTGACAGATGAGTTAACTGCAGAAAAATTAAAATA
CTGGCAGTTGCAACAGCGGTTAAATGCCATGTCAAGTTGCGGAGAGGATGGGGACAGAAGAGAGTTGGAATCCTGATGACAATGATACGT
TTCATATATAAACACCGTGTATATTCAGGTTTAAGTATAGGAAGAGGCAGAGTGTAATTATTCTTATGTCACTGAATCATGCACTTGTCC
TTGTTGAATAGCTCGTGTGGGAAGAATCCATCTCCAAGAATCAATAAACAAAATAATGAGCGCATAGATAATTTCTTCATTTGTTTGACA
AGTAGGTGCTGAAAACAAGCTTCTTGTGCAGATTCACGTCAAGGGATTATTATTTTTATTTAGATATAGAAGATTGTGGAGGGAGGAAGG
GCGGGCTCAGCGGGCAGAGACTAGAGAGTGGGAGTGGTGGGTTCAATTTCGAATTTCATTTGTAGATCCTTAGTTTATGATGTAGTCAAT
ATTAAGGTGTAATTTTGTATCATATATGATGATCATGAGATGTGTGTTCAATAAAGCTTTTAGCTTCACAAGCATCCCTCAAGCCTAACA
TATTTGTGGCCGTTGCCAAATTGCCATTGCATAAATGGAGAGATGGATCTGGTACTGTTGGACCCAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	2

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118993	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	23
5	129719	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	16

Preceding Unigenes (1)

Unigene	Build
SGN-U215823	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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