Solanum lycopersicum mRNA Solyc09g090910.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc09g090910.1.1
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Length
849
|
|
Description
Auxin responsive protein (AHRD V1 ***- B3U2A2_CUCSA); contains Interpro domain(s) IPR003311 AUX/IAA protein
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Location(s)
SL2.50ch09:70314836..70317752
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- GO:0046983
- Length
- 2917
- Sifter term
- GO:0005515
- GO:0016564
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc09g090910.1.1 Auxin responsive protein (AHRD V1 ***- B3U2A2_CUCSA); contains Interpro domain(s) IPR003311 AUX/IAA protein
ATGGAACCAATTCTTAGTGAAAAAGGTACAAAAATGGAGCAAGATTACAATATGGGTATGTGTTCTGAGGATGAAACAGA
GCTTGAGTTGGggttaggtcttagccttaacagtgggggtgggggtggtggggtgggGGGAAAGACTAAGAAATCACCAT
GGGGTGAGTATGGTAGGATTTTAACTGCTAAAGATTTTCCTAATGGATTTTCAGCTAAGAGATCCATTAATGTTGGTGTT
TCTGGTACTAAAAGAGCTGCTGATTTTGCTGGTTCTACAACTGAGGTTGGATCTCCTCCTACTGGTGCAAGTCAGGTTGT
GGGATGGCCACCCATAAGGGCATACAGAATGAACAGCTTGGTTAATCAATCAAAGGTTCTAAATGCTGATGATGAGAAGG
GAGTTGGCGGGAACGATAAGAAGGAGCACTCGAAGAAGAAGATCAATCATGGGAACACTAAGGATGATGCAGCATCGGTT
AAAGAAAAGGGGCATCTTGGTTTTGTGAAGGTGAATATGGATGGTTTGCCTATTGGAAGAAAGGTGGATTTGAATGCTCA
TACTTGCTATGAATCGTTAGCCGAAACCTTGGAGGATATGTTCTTTAAATCTACCAAAAGCGGTGAAAAGGAACAAGCAA
CTAAGTCTTTTAAGCTCTTGGATGGATCATCTGAATTTGTGCTCACATATGAGGATAAAGAAGGAGACTGGATGCTTGTT
GGAGATGTTCCATTCGGGATGTTTCTCAACACTGTGAAAAGGCTAAGAATCATGAGGACTTCTGAGGCTAATGGACTTGC
TCCAAGAATCCCTCAGAAGCAAGAGAAACACAAAGGAAAACCTATCTAA
ATGGAACCAATTCTTAGTGAAAAAGGTACAAAAATGGAGCAAGATTACAATATGGGTATGTGTTCTGAGGATGAAACAGA
GCTTGAGTTGGggttaggtcttagccttaacagtgggggtgggggtggtggggtgggGGGAAAGACTAAGAAATCACCAT
GGGGTGAGTATGGTAGGATTTTAACTGCTAAAGATTTTCCTAATGGATTTTCAGCTAAGAGATCCATTAATGTTGGTGTT
TCTGGTACTAAAAGAGCTGCTGATTTTGCTGGTTCTACAACTGAGGTTGGATCTCCTCCTACTGGTGCAAGTCAGGTTGT
GGGATGGCCACCCATAAGGGCATACAGAATGAACAGCTTGGTTAATCAATCAAAGGTTCTAAATGCTGATGATGAGAAGG
GAGTTGGCGGGAACGATAAGAAGGAGCACTCGAAGAAGAAGATCAATCATGGGAACACTAAGGATGATGCAGCATCGGTT
AAAGAAAAGGGGCATCTTGGTTTTGTGAAGGTGAATATGGATGGTTTGCCTATTGGAAGAAAGGTGGATTTGAATGCTCA
TACTTGCTATGAATCGTTAGCCGAAACCTTGGAGGATATGTTCTTTAAATCTACCAAAAGCGGTGAAAAGGAACAAGCAA
CTAAGTCTTTTAAGCTCTTGGATGGATCATCTGAATTTGTGCTCACATATGAGGATAAAGAAGGAGACTGGATGCTTGTT
GGAGATGTTCCATTCGGGATGTTTCTCAACACTGTGAAAAGGCTAAGAATCATGAGGACTTCTGAGGCTAATGGACTTGC
TCCAAGAATCCCTCAGAAGCAAGAGAAACACAAAGGAAAACCTATCTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc09g090910.1.1 | SL2.50ch09:70314835..70317752 | 283 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc09g090910.1 | SL2.50ch09:70314836..70317752 | 2,917 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc09g090910.1.1.1 | SL2.50ch09:70317442..70317752 | 311 | - | n/a |
| exon | exon:Solyc09g090910.1.1.2 | SL2.50ch09:70316096..70316403 | 308 | - | 1 |
| exon | exon:Solyc09g090910.1.1.3 | SL2.50ch09:70315722..70315839 | 118 | - | 2 |
| exon | exon:Solyc09g090910.1.1.4 | SL2.50ch09:70315090..70315151 | 62 | - | 1 |
| exon | exon:Solyc09g090910.1.1.5 | SL2.50ch09:70314836..70314885 | 50 | - | 2 |
| intron | intron:Solyc09g090910.1.1.2 | SL2.50ch09:70316404..70317441 | n/a | - | n/a |
| intron | intron:Solyc09g090910.1.1.3 | SL2.50ch09:70315840..70316095 | n/a | - | n/a |
| intron | intron:Solyc09g090910.1.1.4 | SL2.50ch09:70315152..70315721 | n/a | - | n/a |
| intron | intron:Solyc09g090910.1.1.5 | SL2.50ch09:70314886..70315089 | n/a | - | n/a |
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