Arabidopsis thaliana mRNA AT5G20730.3
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Name | Type | Organism | |
Synonyms / aliases
NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23, IAA25
|
Length
4,321
|
Description
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
|
Location(s)
TAIR10ch05:7016445..7022113
|
GFF source
TAIR10
|
![]() | spliced mRNA sequence, including UTRs |
>AT5G20730.3 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
TTTAGCAGACCTTTTGGTAGTTGTCCTGGTCGCTGATCATCCCTTTCCGACAACTCTGTTGCTCTTTCTCTCACGTTTGA
GTCTTAATCTTCGATTGTCCTTGGTCATCCTTAAGTTTTGTTTTTCTCTTTCGATTCATTTTCCAGATTTCTTTTTATAG
AAACCCGTCTCTTTGATTTGATTCCCCCCAAGAAAGGAAAGCAAAACAAAGAAGAGCAGCTGAATCAAGTAACTTTGTGG
GTGTTTTTGAATTATCTGACTCGAGATAAAGAGCTTCGTTAAAAACGGAATCTTTTTTAAGGTCGTATGCTTTGTTTGTC
TCTCCGGAGATTCCGCGTGTGAAAAGTCGTGGTTTTTGATCTCTTTGAGATACTTAAAATTTCCGAGAAATTGGCGGCTC
TGTCGGAGATAAAAAGCTGAGATCTTGGAGTTCCCCATTTCTGATTAACGATTCTCTCTGCTGTTACTTGAGCTAGGAAG
CTATTAACAACTTGAGTGAAAGTTTAGGGCTTTTGATGAAGCTCTCACGCAAAGAGCTTAGCTTTGTATAAGCTCAGATT
CAGATTATTTATTGGGTTTATTCTTCAGAGAAAGTAAAGTTGAGTGATCATGAAAGCTCCTTCATCAAATGGAGTTTCTC
CTAATCCTGTTGAAGGAGAAAGGAGAAATATAAACTCAGAGCTATGGCACGCTTGTGCTGGGCCATTGATTTCGTTGCCT
CCAGCAGGAAGTCTTGTTGTTTACTTCCCTCAAGGTCACAGTGAGCAAGTCGCGGCTTCAATGCAGAAGCAGACTGATTT
CATACCAAGTTACCCGAATCTTCCTTCCAAGCTCATATGCATGCTCCACAATGTTACACTGAATGCTGATCCTGAGACGG
ATGAGGTCTATGCGCAGATGACTCTTCAGCCAGTAAACAAATATGACAGAGATGCATTGCTTGCTTCTGACATGGGTCTT
AAGCTAAACAGACAACCTAATGAATTTTTCTGCAAAACCCTCACGGCGAGTGACACAAGTACTCACGGTGGATTTTCTGT
ACCCCGACGAGCTGCTGAGAAAATCTTTCCTGCTCTGGATTTCTCGATGCAACCACCTTGTCAGGAGCTTGTTGCTAAGG
ATATTCATGACAACACATGGACTTTCAGACATATTTATCGAGGTCAACCAAAAAGGCACTTGCTAACTACAGGCTGGAGT
GTGTTTGTCAGCACGAAAAGGCTCTTTGCTGGAGACTCTGTTCTTTTTATAAGAGATGGAAAGGCGCAACTTCTGTTGGG
GATAAGACGTGCAAATAGACAACAGCCTGCACTTTCTTCATCTGTAATATCAAGTGATAGCATGCACATCGGAGTTCTTG
CAGCTGCAGCTCATGCTAATGCTAATAACAGTCCTTTCACCATTTTCTACAACCCGAGGTGGGCTGCTCCTGCTGAGTTT
GTGGTTCCTTTAGCCAAGTATACCAAAGCGATGTACGCTCAAGTTTCCCTCGGTATGCGGTTTAGAATGATATTTGAGAC
TGAAGAATGTGGAGTTCGTCGGTATATGGGTACAGTTACCGGTATCAGTGATCTTGATCCAGTGAGATGGAAAAACTCTC
AGTGGCGGAATCTTCAGATTGGATGGGATGAGTCAGCTGCTGGTGATAGGCCCAGTCGAGTTTCAGTTTGGGACATTGAA
CCGGTTTTAACTCCTTTCTACATATGTCCTCCTCCATTTTTCCGACCTCGCTTTTCTGGACAACCTGGAATGCCAGATGA
TGAGACTGACATGGAGTCTGCACTGAAGAGAGCAATGCCATGGCTTGATAATAGCTTAGAGATGAAAGACCCTTCGAGTA
CTATCTTTCCTGGTCTGAGTTTAGTTCAGTGGATGAATATGCAGCAGCAGAACGGCCAGCTACCCTCTGCTGCTGCACAG
CCAGGTTTCTTCCCATCAATGCTTTCGCCAACCGCGGCGCTGCACAACAATCTTGGCGGCACTGATGATCCCTCCAAGTT
ACTGAGCTTTCAGACGCCGCACGGGGGGATTTCCTCCTCAAATCTCCAATTTAACAAACAGAATCAGCAAGCCCCAATGT
CTCAGTTGCCTCAGCCACCAACTACGTTGTCCCAACAACAGCAGCTGCAGCAATTGTTGCACTCCTCTTTGAACCATCAA
CAACAGCAATCGCAGTCTCAACAACAGCAACAACAACAACAGTTGCTGCAGCAGCAACAACAATTGCAGTCTCAACAACA
CAGCAACAACAATCAATCGCAGTCTCAGCAACAACAACAATTGCTCCAGCAGCAACAACAACAACAACTGCAGCAACAAC
ATCAACAACCGTTACAGCAACAGACTCAGCAGCAGCAGCTAAGAACACAGCCATTGCAATCTCACTCGCATCCACAGCCA
CAACAGTTACAACAACATAAGTTGCAGCAACTTCAGGTTCCACAGAATCAGCTTTACAATGGTCAACAAGCAGCGCAGCA
GCATCAGTCGCAACAAGCATCTACACATCATTTGCAACCACAATTAGTTTCGGGATCAATGGCAAGCAGTGTCATCACGC
CTCCGTCCAGCTCCCTTAATCAAAGCTTTCAACAGCAACAACAACAGTCTAAGCAACTTCAACAAGCACATCACCATTTA
GGTGCTAGCACTAGCCAGAGTAGTGTAATTGAAACCAGCAAGTCTTCATCCAATCTGATGTCCGCACCGCCGCAAGAGAC
ACAGTTTTCACGACAAGTAGAACAGCAGCAGCCTCCTGGTCTCAACGGGCAGAATCAGCAAACACTTTTGCAGCAGAAAG
CTCACCAGGCACAGGCCCAACAGATATTCCAGCAGAGTCTCTTGGAACAGCCGCATATACAGTTTCAGCTGTTACAGAGA
TTACAACAGCAACAGCAGCAGCAATTTCTTTCGCCGCAGTCTCAGTTACCACACCATCAATTGCAAAGCCAGCAGTTGCA
ACAGCTGCCTACTCTCTCTCAAGGTCATCAGTTTCCGTCATCTTGCACTAACAATGGCTTATCGACGTTGCAACCACCTC
AAATGCTGGTGAGCCGACCTCAGGAAAAACAAAACCCACCGGTTGGGGGAGGGGTCAAAGCTTATTCAGGCATCACAGAT
GGAGGAGATGCACCTTCCTCTTCAACGTCGCCTTCCACCAACAACTGTCAGATCTCTTCTTCAGGCTTTCTCAACAGAAG
CCAAAGCGGGCCAGCGATCTTGATACCTGATGCAGCGATTGATATGTCTGGTAATCTTGTTCAGGATCTTTACAGCAAAT
CCGATATGCGGCTAAAACAAGAACTCGTGGGTCAGCAAAAGTCCAAAGCTAGTTTAACAGATCATCAACTAGAAGCATCT
GCCTCTGGAACTTCTTACGGTTTAGATGGAGGCGAAAACAACAGACAACAAAATTTCTTGGCTCCAACTTTTGGCCTTGA
CGGTGATTCCAGGAACAGCTTGCTCGGTGGAGCTAATGTTGATAATGGCTTTGTGCCTGACACGCTACTCTCGAGGGGAT
ATGACTCCCAGAAAGATCTTCAGAACATGCTTTCAAACTATGGAGGAGTGACAAATGACATTGGTACAGAGATGTCTACT
TCAGCTGTAAGAACTCAATCTTTTGGTGTCCCCAATGTGCCCGCCATTTCGAACGATCTAGCTGTCAACGATGCTGGAGT
TCTTGGTGGTGGATTGTGGCCAGCTCAGACTCAGCGAATGCGAACTTATACAAAGGTGCAAAAACGAGGCTCAGTGGGGA
GATCAATAGACGTCAACCGTTACAGAGGTTACGATGAGCTGAGGCATGATCTAGCGCGCATGTTTGGGATCGAAGGACAG
CTCGAAGATCCTCAAACATCTGACTGGAAACTTGTTTATGTCGATCATGAAAATGACATCCTCCTCGTCGGCGATGATCC
ATGGGAAGAATTCGTAAACTGTGTTCAGAGCATTAAGATCCTTTCATCAGCTGAGGTTCAGCAGATGAGCTTAGACGGGA
ACTTTGCCGGTGTACCAGTTACTAATCAAGCTTGTAGTGGCGCCACTTCGTTTAACCGGTGATGGCAGAAGAGTTCTCTC
ACAGACAAAGATTCTTTTTTCTTCGTTTTGTAATATAACTTCTCGTTGATAACATGTCTCAAGTTTCCACTGGGCACTGT
AGAGCATTTACCTGTAAAATATCTTCCACTAAGTTTACACGGAGATTTTATTTGCTGTGAGTCACTGTTTCTACCAAGTT
TAACTGATCAACTGAAACCGCTTGTAACCAAAAAGAGAAGGAAAAACATGAAATCAGCAATAAAATCACATTTTCAAACT
C
TTTAGCAGACCTTTTGGTAGTTGTCCTGGTCGCTGATCATCCCTTTCCGACAACTCTGTTGCTCTTTCTCTCACGTTTGA
GTCTTAATCTTCGATTGTCCTTGGTCATCCTTAAGTTTTGTTTTTCTCTTTCGATTCATTTTCCAGATTTCTTTTTATAG
AAACCCGTCTCTTTGATTTGATTCCCCCCAAGAAAGGAAAGCAAAACAAAGAAGAGCAGCTGAATCAAGTAACTTTGTGG
GTGTTTTTGAATTATCTGACTCGAGATAAAGAGCTTCGTTAAAAACGGAATCTTTTTTAAGGTCGTATGCTTTGTTTGTC
TCTCCGGAGATTCCGCGTGTGAAAAGTCGTGGTTTTTGATCTCTTTGAGATACTTAAAATTTCCGAGAAATTGGCGGCTC
TGTCGGAGATAAAAAGCTGAGATCTTGGAGTTCCCCATTTCTGATTAACGATTCTCTCTGCTGTTACTTGAGCTAGGAAG
CTATTAACAACTTGAGTGAAAGTTTAGGGCTTTTGATGAAGCTCTCACGCAAAGAGCTTAGCTTTGTATAAGCTCAGATT
CAGATTATTTATTGGGTTTATTCTTCAGAGAAAGTAAAGTTGAGTGATCATGAAAGCTCCTTCATCAAATGGAGTTTCTC
CTAATCCTGTTGAAGGAGAAAGGAGAAATATAAACTCAGAGCTATGGCACGCTTGTGCTGGGCCATTGATTTCGTTGCCT
CCAGCAGGAAGTCTTGTTGTTTACTTCCCTCAAGGTCACAGTGAGCAAGTCGCGGCTTCAATGCAGAAGCAGACTGATTT
CATACCAAGTTACCCGAATCTTCCTTCCAAGCTCATATGCATGCTCCACAATGTTACACTGAATGCTGATCCTGAGACGG
ATGAGGTCTATGCGCAGATGACTCTTCAGCCAGTAAACAAATATGACAGAGATGCATTGCTTGCTTCTGACATGGGTCTT
AAGCTAAACAGACAACCTAATGAATTTTTCTGCAAAACCCTCACGGCGAGTGACACAAGTACTCACGGTGGATTTTCTGT
ACCCCGACGAGCTGCTGAGAAAATCTTTCCTGCTCTGGATTTCTCGATGCAACCACCTTGTCAGGAGCTTGTTGCTAAGG
ATATTCATGACAACACATGGACTTTCAGACATATTTATCGAGGTCAACCAAAAAGGCACTTGCTAACTACAGGCTGGAGT
GTGTTTGTCAGCACGAAAAGGCTCTTTGCTGGAGACTCTGTTCTTTTTATAAGAGATGGAAAGGCGCAACTTCTGTTGGG
GATAAGACGTGCAAATAGACAACAGCCTGCACTTTCTTCATCTGTAATATCAAGTGATAGCATGCACATCGGAGTTCTTG
CAGCTGCAGCTCATGCTAATGCTAATAACAGTCCTTTCACCATTTTCTACAACCCGAGGTGGGCTGCTCCTGCTGAGTTT
GTGGTTCCTTTAGCCAAGTATACCAAAGCGATGTACGCTCAAGTTTCCCTCGGTATGCGGTTTAGAATGATATTTGAGAC
TGAAGAATGTGGAGTTCGTCGGTATATGGGTACAGTTACCGGTATCAGTGATCTTGATCCAGTGAGATGGAAAAACTCTC
AGTGGCGGAATCTTCAGATTGGATGGGATGAGTCAGCTGCTGGTGATAGGCCCAGTCGAGTTTCAGTTTGGGACATTGAA
CCGGTTTTAACTCCTTTCTACATATGTCCTCCTCCATTTTTCCGACCTCGCTTTTCTGGACAACCTGGAATGCCAGATGA
TGAGACTGACATGGAGTCTGCACTGAAGAGAGCAATGCCATGGCTTGATAATAGCTTAGAGATGAAAGACCCTTCGAGTA
CTATCTTTCCTGGTCTGAGTTTAGTTCAGTGGATGAATATGCAGCAGCAGAACGGCCAGCTACCCTCTGCTGCTGCACAG
CCAGGTTTCTTCCCATCAATGCTTTCGCCAACCGCGGCGCTGCACAACAATCTTGGCGGCACTGATGATCCCTCCAAGTT
ACTGAGCTTTCAGACGCCGCACGGGGGGATTTCCTCCTCAAATCTCCAATTTAACAAACAGAATCAGCAAGCCCCAATGT
CTCAGTTGCCTCAGCCACCAACTACGTTGTCCCAACAACAGCAGCTGCAGCAATTGTTGCACTCCTCTTTGAACCATCAA
CAACAGCAATCGCAGTCTCAACAACAGCAACAACAACAACAGTTGCTGCAGCAGCAACAACAATTGCAGTCTCAACAACA
CAGCAACAACAATCAATCGCAGTCTCAGCAACAACAACAATTGCTCCAGCAGCAACAACAACAACAACTGCAGCAACAAC
ATCAACAACCGTTACAGCAACAGACTCAGCAGCAGCAGCTAAGAACACAGCCATTGCAATCTCACTCGCATCCACAGCCA
CAACAGTTACAACAACATAAGTTGCAGCAACTTCAGGTTCCACAGAATCAGCTTTACAATGGTCAACAAGCAGCGCAGCA
GCATCAGTCGCAACAAGCATCTACACATCATTTGCAACCACAATTAGTTTCGGGATCAATGGCAAGCAGTGTCATCACGC
CTCCGTCCAGCTCCCTTAATCAAAGCTTTCAACAGCAACAACAACAGTCTAAGCAACTTCAACAAGCACATCACCATTTA
GGTGCTAGCACTAGCCAGAGTAGTGTAATTGAAACCAGCAAGTCTTCATCCAATCTGATGTCCGCACCGCCGCAAGAGAC
ACAGTTTTCACGACAAGTAGAACAGCAGCAGCCTCCTGGTCTCAACGGGCAGAATCAGCAAACACTTTTGCAGCAGAAAG
CTCACCAGGCACAGGCCCAACAGATATTCCAGCAGAGTCTCTTGGAACAGCCGCATATACAGTTTCAGCTGTTACAGAGA
TTACAACAGCAACAGCAGCAGCAATTTCTTTCGCCGCAGTCTCAGTTACCACACCATCAATTGCAAAGCCAGCAGTTGCA
ACAGCTGCCTACTCTCTCTCAAGGTCATCAGTTTCCGTCATCTTGCACTAACAATGGCTTATCGACGTTGCAACCACCTC
AAATGCTGGTGAGCCGACCTCAGGAAAAACAAAACCCACCGGTTGGGGGAGGGGTCAAAGCTTATTCAGGCATCACAGAT
GGAGGAGATGCACCTTCCTCTTCAACGTCGCCTTCCACCAACAACTGTCAGATCTCTTCTTCAGGCTTTCTCAACAGAAG
CCAAAGCGGGCCAGCGATCTTGATACCTGATGCAGCGATTGATATGTCTGGTAATCTTGTTCAGGATCTTTACAGCAAAT
CCGATATGCGGCTAAAACAAGAACTCGTGGGTCAGCAAAAGTCCAAAGCTAGTTTAACAGATCATCAACTAGAAGCATCT
GCCTCTGGAACTTCTTACGGTTTAGATGGAGGCGAAAACAACAGACAACAAAATTTCTTGGCTCCAACTTTTGGCCTTGA
CGGTGATTCCAGGAACAGCTTGCTCGGTGGAGCTAATGTTGATAATGGCTTTGTGCCTGACACGCTACTCTCGAGGGGAT
ATGACTCCCAGAAAGATCTTCAGAACATGCTTTCAAACTATGGAGGAGTGACAAATGACATTGGTACAGAGATGTCTACT
TCAGCTGTAAGAACTCAATCTTTTGGTGTCCCCAATGTGCCCGCCATTTCGAACGATCTAGCTGTCAACGATGCTGGAGT
TCTTGGTGGTGGATTGTGGCCAGCTCAGACTCAGCGAATGCGAACTTATACAAAGGTGCAAAAACGAGGCTCAGTGGGGA
GATCAATAGACGTCAACCGTTACAGAGGTTACGATGAGCTGAGGCATGATCTAGCGCGCATGTTTGGGATCGAAGGACAG
CTCGAAGATCCTCAAACATCTGACTGGAAACTTGTTTATGTCGATCATGAAAATGACATCCTCCTCGTCGGCGATGATCC
ATGGGAAGAATTCGTAAACTGTGTTCAGAGCATTAAGATCCTTTCATCAGCTGAGGTTCAGCAGATGAGCTTAGACGGGA
ACTTTGCCGGTGTACCAGTTACTAATCAAGCTTGTAGTGGCGCCACTTCGTTTAACCGGTGATGGCAGAAGAGTTCTCTC
ACAGACAAAGATTCTTTTTTCTTCGTTTTGTAATATAACTTCTCGTTGATAACATGTCTCAAGTTTCCACTGGGCACTGT
AGAGCATTTACCTGTAAAATATCTTCCACTAAGTTTACACGGAGATTTTATTTGCTGTGAGTCACTGTTTCTACCAAGTT
TAACTGATCAACTGAAACCGCTTGTAACCAAAAAGAGAAGGAAAAACATGAAATCAGCAATAAAATCACATTTTCAAACT
C
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | AT5G20730.3 | TAIR10ch05:7016704..7021504 | 1,150 | - | n/a |
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Features this mRNA is a part of |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon-auto18327409 | TAIR10ch05:7021459..7022113 | 655 | - | n/a |
exon | exon-auto18327410 | TAIR10ch05:7021026..7021138 | 113 | - | n/a |
exon | exon-auto18327411 | TAIR10ch05:7020830..7020925 | 96 | - | n/a |
exon | exon-auto18327412 | TAIR10ch05:7020669..7020725 | 57 | - | n/a |
exon | exon-auto18327413 | TAIR10ch05:7020425..7020580 | 156 | - | n/a |
exon | exon-auto18327414 | TAIR10ch05:7020253..7020337 | 85 | - | n/a |
exon | exon-auto18327415 | TAIR10ch05:7020071..7020161 | 91 | - | n/a |
exon | exon-auto18327416 | TAIR10ch05:7019821..7019988 | 168 | - | n/a |
exon | exon-auto18327417 | TAIR10ch05:7019534..7019729 | 196 | - | n/a |
exon | exon-auto18327418 | TAIR10ch05:7019297..7019435 | 139 | - | n/a |
exon | exon-auto18327419 | TAIR10ch05:7017241..7019219 | 1,979 | - | n/a |
exon | exon-auto18327420 | TAIR10ch05:7016972..7017162 | 191 | - | n/a |
exon | exon-auto18327421 | TAIR10ch05:7016769..7016884 | 116 | - | n/a |
exon | exon-auto18327422 | TAIR10ch05:7016445..7016723 | 279 | - | n/a |
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- Genetic loci
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