Sol Genomics Network

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Unigene SGN-U563843

Unigene Basic Information

Unigene ID:	SGN-U563843
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1482 bp

>SGN-U563843 Tomato 200607 #2 (36 members)
GATAATAAAAATTATAATAAACCAAAACTATGTACTTCGCATTTTACATATTAAATTGTAGAAATTGAGTTACCAAATTTCAGTGTCTTA
CACTTCAACAATTCTTCTTTCTTGGCCAAAACATAAAAATGCATACAAAAACTGATTCAGAAGATACGAGCTTGGCTCCTTCGTCGCCGG
ACAATAGAGGGCCGACGGCGTATTACGTTCAGAGTCCGTCACGTGATTCTCACGATGGCGAGAAGACAACGACGTCGTTTCACTCTACTC
CTGTTATCAGTCCCATGGGTTCTCCTCCTCACTCTCACTCATCCGTCGGCCGTCACTCCCGTGATTCCTCTTCCTCCAGATTCTCCGGCT
CCCTCAAGCCTGGATCTCGGAAGATTTTACCCGACGCCGCCGGAGGCGTCGGCGGCCGTCACCACCGCAAAGGGCAGAAGCCCTGGAAGG
AATGTGATGTTATTGAGGAAGAAGGACTACTTGAAGATGATAGATCCAGTAAATCTCTTCCACGTCGTTGCTATGTCCTTGCTTTTGTTG
TTGGTTTCTTCATCCTTTTCTCCTTCTTTGCTCTCATCCTTTGGGGTGCTAGTCGACCTCAGAAACCCAAAATCACCATGAGGACCATAA
AATTTGATCATTTTGGGATTCAAGCTGGTTCTGATGCCACAGGAGTAGCAACTGATATGATCTCCATGAATGCTACTGTGAAATTCCTTT
ACCGTAATACTGCATCATTTTTCGGTGTACATGTCACATCAACCCCTCTTGATCTCTCATTTTCAGAACTCACAATTGGATCCGGAGCTA
TGAAGAAATTTTACCAATCAAGAAAGAGCCAAAGAGTTGTAGCTGTATCAGTTATAGGGAACAAGATTCCATTATATGGAGGTGGAGCAA
GTTTGAGCACACCAGCAGGGGCGACGCCATTACCAGTGCCACTAAAATTAAACTTCAAGCTTCGATCAAGAGCTTATGTTTTAGGGAAAA
TGGTAAAGCCCAAGTTCTACAAGACAATTGATTGTCTACTTACTCTTCGTCCCCAGAAGATGAACGCCGCAATTTCACTAAAGAATTGTA
CCTACAGTTGATTATGGAGCTATCTAAGTTGGTAAAGTTTTGATCTTTTTTCTCAAATCTTGATTGTCAACAAAGTGAATTGATAGCTAT
TGGGGTCTCTATCTTTTGCCCCCACTACTTACCAACTTTCTCTCTGGAGTAGAATGTGGACAGCCTGTGTTACATGTTACAACAAATTTT
CCAACTAGCCGCTACTGGAAAATGGACAGAACAAGAATGTGACAATTATTCATTTCTCATGTTAATTCACCTTGTTATTATATAATAATC
TATACCACAATATATAGATTGATTTGTTTATTTGTTTTGGAAGTTGAATAGCACTTCTTTTTTCCAATTTTATTACTAAATTATTAGTGT
GTAATTCCAAGTTGTTAATGAATAATGGTCTCTTGAGTTTCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	Sl_LeafCherry01	epidermis	226	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	6
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	3

mRNA member sequences (36)

Alignment image suppressed for unigene with 36 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316389	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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